RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 ODF2Q5BJF6 829 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 TTC27Q6P3X3 843 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 MREGQ8N565 214 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 MYCBPAPQ8TBZ2 947 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 SP7Q8TDD2 431 aaPredicted RBP26.08■■□□□ 1.77
CDPF1-201ENST00000314567 ASNSD1Q9NWL6 643 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 NLRC5Q86WI3 1866 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 LRCH4O75427 683 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 CSPG5O95196 566 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 ZNF143P52747 638 aaPredicted RBP26.08■■□□□ 1.77
CDPF1-201ENST00000314567 DUPD1Q68J44 220 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 PMF1Q6P1K2 205 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 FAM171BQ6P995 826 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 SPATA18Q8TC71 538 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 AUTS2Q8WXX7 1259 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 SLITRK1Q96PX8 696 aa26.08■■□□□ 1.77
CDPF1-201ENST00000314567 PLXNA4Q9HCM2 1894 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 RNF8O76064 485 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 GPD1P21695 349 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 ECHS1P30084 290 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 SCNN1AP37088 669 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 RPL34P49207 117 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 SLC25A11Q02978 314 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 ELAVL2Q12926 359 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 SLC39A12Q504Y0 691 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 CCDC105Q8IYK2 499 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 EMC1Q8N766 993 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 RIN2Q8WYP3 895 aaPredicted RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 CLP1Q92989 425 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 GDAP1L1Q96MZ0 367 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 HNRNPABQ99729 332 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 TRIM51Q9BSJ1 452 aa26.07■■□□□ 1.76
CDPF1-201ENST00000314567 UBE2OQ9C0C9 1292 aaKnown RBP26.07■■□□□ 1.76
CDPF1-201ENST00000314567 ADAM12O43184 909 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 DAPK3O43293 454 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 TCF4P15884 667 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 CBX1P83916 185 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 ZFYVE27Q5T4F4 411 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 OLFML1Q6UWY5 402 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 FAM35AQ86V20 835 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 KLHL23Q8NBE8 558 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 PGLYRP2Q96PD5 576 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 CNPY3Q9BT09 278 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 KRT82Q9NSB4 513 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 PCDHB12Q9Y5F1 795 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 LINC01553A4QN01 128 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 C2CD4BA6NLJ0 364 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 GABBR2O75899 941 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 FGF18O76093 207 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 DNAJB2P25686 324 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 PCK1P35558 622 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 ACADSBP45954 432 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 TSPY1Q01534 308 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 SLC6A3Q01959 620 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 TRADDQ15628 312 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 USP41Q3LFD5 358 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 SYDE1Q6ZW31 735 aaPredicted RBP26.06■■□□□ 1.76
CDPF1-201ENST00000314567 GRK7Q8WTQ7 553 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 HSFY1Q96LI6 401 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 C17orf80Q9BSJ5 609 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 ZCWPW1Q9H0M4 648 aa26.06■■□□□ 1.76
CDPF1-201ENST00000314567 FEZ2Q9UHY8 353 aaPredicted RBP26.06■■□□□ 1.76
CDPF1-201ENST00000314567 DPYSL4O14531 572 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 ECEL1O95672 775 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 SOD2P04179 222 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 ZNF280DQ6N043 979 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 SPOCD1Q6ZMY3 1216 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 RNF25Q96BH1 459 aaPredicted RBP26.05■■□□□ 1.76
CDPF1-201ENST00000314567 KCNK16Q96T55 309 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 GDF15Q99988 308 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 HERPUD2Q9BSE4 406 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 DCLK3Q9C098 648 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 MED4Q9NPJ6 270 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 CHST7Q9NS84 486 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 PTPRDP23468 1912 aa26.05■■□□□ 1.76
CDPF1-201ENST00000314567 TJP3O95049 919 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 DESP17661 470 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 BDNFP23560 247 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 PBX2P40425 430 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 MAP3K7CLP57077 242 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 SLC8A3P57103 927 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 CCNG2Q16589 344 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 KIAA1841Q6NSI8 718 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 VPS52Q8N1B4 723 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 NCAPGQ9BPX3 1015 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 AAASQ9NRG9 546 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 EFR3BQ9Y2G0 817 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 TBC1D4O60343 1298 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 AP1G2O75843 785 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 CA3P07451 260 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 CTNNB1P35222 781 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 ATP13A4Q4VNC1 1196 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 CLEC20AQ6ZU45 233 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 DDX42Q86XP3 938 aaKnown RBP eCLIP26.04■■□□□ 1.76
CDPF1-201ENST00000314567 ARFGAP1Q8N6T3 406 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 SMOQ99835 787 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 DUSP16Q9BY84 665 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 FAM129AQ9BZQ8 928 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 DPH5Q9H2P9 285 aa26.04■■□□□ 1.76
CDPF1-201ENST00000314567 ALG13Q9NP73 1137 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms