RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 PGS1Q32NB8 556 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 NEK5Q6P3R8 708 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 CXorf21Q9HAI6 301 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 TRPV5Q9NQA5 729 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SUN2Q9UH99 717 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 STXBP5LQ9Y2K9 1186 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 HSPA1AP0DMV8 641 aaKnown RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 HSPA1BP0DMV9 641 aaKnown RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 PPP6R3Q5H9R7 873 aaPredicted RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 CGB2Q6NT52 195 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 CDH24Q86UP0 819 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 MCUQ8NE86 351 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 PSMA8Q8TAA3 256 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 POMGNT1Q8WZA1 660 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 HDAC11Q96DB2 347 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 VPS45Q9NRW7 570 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 GIT1Q9Y2X7 761 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 LINC00854A0A1B0GVQ3 168 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
EBF1-201ENST00000313708 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
EBF1-201ENST00000313708 P4HBP07237 508 aaKnown RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 PHC1P78364 1004 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 GSTM4Q03013 218 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 ZNF829Q3KNS6 432 aaPredicted RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 FASTKD1Q53R41 847 aaKnown RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 USP17L6PQ6QN14 398 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SNX27Q96L92 541 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 DGCR6LQ9BY27 220 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 FRMD8Q9BZ67 464 aaPredicted RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 DGKBQ9Y6T7 804 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 TSC22D2O75157 780 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 HLA-DOAP06340 250 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SMU1Q2TAY7 513 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 CEP295NLQ96MC4 621 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 PRICKLE1Q96MT3 831 aaPredicted RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 PNMA5Q96PV4 448 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 USP29Q9HBJ7 922 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SEMA3DO95025 777 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 KRT7P08729 469 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 ARPP19P56211 112 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 ROR1Q01973 937 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 SLFN11Q7Z7L1 901 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 POC5Q8NA72 575 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 REXO4Q9GZR2 422 aaKnown RBP12.75□□□□□ -0.37
EBF1-201ENST00000313708 TMEM206Q9H813 350 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 IL1RL2Q9HB29 575 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 GNPTGQ9UJJ9 305 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 MID2Q9UJV3 735 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 PCDHA1Q9Y5I3 950 aa12.75□□□□□ -0.37
EBF1-201ENST00000313708 DLG5Q8TDM6 1919 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 SRP72O76094 671 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 COX4I1P13073 169 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 VEGFAP15692 232 aaPredicted RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 TCEA1P23193 301 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 CDH15P55291 814 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 POLD3Q15054 466 aaPredicted RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 NEK10Q6ZWH5 1172 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 POLNQ7Z5Q5 900 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 PCSK1NQ9UHG2 260 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 SORCS3Q9UPU3 1222 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 CDYLQ9Y232 598 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 POMPQ9Y244 141 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 IL6STP40189 918 aaPredicted RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 CLK1P49759 484 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 PPM1LQ5SGD2 360 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 CCSAPQ6IQ19 270 aaPredicted RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 SLC26A11Q86WA9 606 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 IFNEQ86WN2 208 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 MCRS1Q96EZ8 462 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 ATP5BP06576 529 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 FCHO2Q0JRZ9 810 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 MICU2Q8IYU8 434 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 STARD8Q92502 1023 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 RAB6BQ9NRW1 208 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 FAM32AQ9Y421 112 aaKnown RBP12.74□□□□□ -0.37
EBF1-201ENST00000313708 IPPQ9Y573 584 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 P4HA1P13674 534 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 DLG3Q92796 817 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 SEL1LQ9UBV2 794 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 SLC9A2Q9UBY0 812 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 PLA2G4CQ9UP65 541 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 COG5Q9UP83 839 aa12.74□□□□□ -0.37
EBF1-201ENST00000313708 APRTP07741 180 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 CETPP11597 493 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 TLR1Q15399 786 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 MAPRE2Q15555 327 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 DNAJC10Q8IXB1 793 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 PTCD3Q96EY7 689 aaKnown RBP12.73□□□□□ -0.37
EBF1-201ENST00000313708 AASDHPPTQ9NRN7 309 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 DNPEPQ9ULA0 475 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 USP17L5A8MUK1 530 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 HNRNPCL2B2RXH8 293 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 hCG_1984214I3L0E3 225 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 KRT6AP02538 564 aa12.73□□□□□ -0.37
EBF1-201ENST00000313708 KRT6BP04259 564 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms