RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ATG2BQ96BY7 2078 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 GTPBP10A4D1E9 387 aaKnown RBP12.68□□□□□ -0.38
SCFD1-201ENST00000311943 TLR5O60602 858 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 OLFM2O95897 454 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 HMBSP08397 361 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 TARSP26639 723 aaKnown RBP12.68□□□□□ -0.38
SCFD1-201ENST00000311943 GPD2P43304 727 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 UBXN1Q04323 297 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 CNGA2Q16280 664 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 CT47A1Q5JQC4 288 aaPredicted RBP12.68□□□□□ -0.38
SCFD1-201ENST00000311943 DNAAF5Q86Y56 855 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 MIB1Q86YT6 1006 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 CELF5Q8N6W0 485 aaKnown RBP12.68□□□□□ -0.38
SCFD1-201ENST00000311943 SLC20A1Q8WUM9 679 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 FAXDC2Q96IV6 333 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 WNT16Q9UBV4 365 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 SCML2Q9UQR0 700 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
SCFD1-201ENST00000311943 XPO1O14980 1071 aaKnown RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 GFPT2O94808 682 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 RTN3O95197 1032 aaPredicted RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 PAEPP09466 180 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 RARGP13631 454 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 BCAT1P54687 386 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 PITX1P78337 314 aaPredicted RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 BST2Q10589 180 aaKnown RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 MTF1Q14872 753 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 PHLDB2Q86SQ0 1253 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 FBXL6Q8N531 539 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 NXPE3Q969Y0 559 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 MFSD1Q9H3U5 465 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 SFMBT1Q9UHJ3 866 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 PIAS3Q9Y6X2 628 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 LRRC10BA6NIK2 292 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 TRIM24O15164 1050 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 GREM1O60565 184 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 FGF19O95750 216 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 COL9A1P20849 921 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 AVPR2P30518 371 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 FZD5Q13467 585 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 UBXN2BQ14CS0 331 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 MLF2Q15773 248 aaPredicted RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 NOP9Q86U38 636 aaKnown RBP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 YAF2Q8IY57 180 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 ZDHHC4Q9NPG8 344 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
SCFD1-201ENST00000311943 HESX1Q9UBX0 185 aa12.67□□□□□ -0.38
SCFD1-201ENST00000311943 E5RJQ4 531 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 F8VZ95 297 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 MSI1O43347 362 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 KLKB1P03952 638 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 FYNP06241 537 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 PLA2G4AP47712 749 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 YWHAEP62258 255 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 ARID5AQ03989 594 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 USP4Q13107 963 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 E4F1Q66K89 784 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 BBS7Q8IWZ6 715 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 FAM71AQ8IYT1 594 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 C1orf131Q8NDD1 294 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 ADAM32Q8TC27 787 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 BHMTQ93088 406 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 PCMTD1Q96MG8 357 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 CPXM1Q96SM3 734 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 BPIFA3Q9BQP9 254 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 CHADO15335 359 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 GRAP2O75791 330 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 ZBED1O96006 694 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 MMEP08473 750 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 YWHAGP61981 247 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 EFEMP1Q12805 493 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 GAB4Q2WGN9 574 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 C10orf120Q5SQS8 335 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 SNX30Q5VWJ9 437 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 PKN3Q6P5Z2 889 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 Q6ZS52 159 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 C12orf40Q86WS4 652 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 DDX1Q92499 740 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 EZH1Q92800 747 aaPredicted RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
SCFD1-201ENST00000311943 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
SCFD1-201ENST00000311943 FAM170BA6NMN3 283 aa12.65□□□□□ -0.38
SCFD1-201ENST00000311943 PAPSS1O43252 624 aaPredicted RBP12.65□□□□□ -0.38
SCFD1-201ENST00000311943 CYP11B1P15538 503 aa12.65□□□□□ -0.38
SCFD1-201ENST00000311943 DAOAP59103 153 aa12.65□□□□□ -0.38
SCFD1-201ENST00000311943 SLC7A9P82251 487 aa12.65□□□□□ -0.38
SCFD1-201ENST00000311943 GAS6Q14393 721 aa12.65□□□□□ -0.38
SCFD1-201ENST00000311943 PON2Q15165 354 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms