RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 PLTPP55058 493 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 GPS2Q13227 327 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 PKDCCQ504Y2 493 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 TFDP3Q5H9I0 405 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 PAQR9Q6ZVX9 377 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 PRELID2Q8N945 189 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 SCAMP5Q8TAC9 235 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 FNIP1Q8TF40 1166 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 TTPALQ9BTX7 342 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 POPDC2Q9HBU9 364 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 SAE1Q9UBE0 346 aaPredicted RBP11.62□□□□□ -0.55
TRIM59-201ENST00000309784 NAALADL1Q9UQQ1 740 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 CDY1Q9Y6F8 540 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 TARSL2A2RTX5 802 aaKnown RBP11.62□□□□□ -0.55
TRIM59-201ENST00000309784 YJEFN3A6XGL0 299 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 E7ENQ6 273 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 FBXO21O94952 628 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 LTFP02788 710 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 PAX3P23760 479 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 ADCY8P40145 1251 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 ARL4AP40617 200 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 HFE2Q6ZVN8 426 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 GPRIN1Q7Z2K8 1008 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 MTERF4Q7Z6M4 381 aaKnown RBP11.62□□□□□ -0.55
TRIM59-201ENST00000309784 UBE2Q2Q8WVN8 375 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 SLITRK1Q96PX8 696 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 ACBD3Q9H3P7 528 aa11.62□□□□□ -0.55
TRIM59-201ENST00000309784 TDRD15B5MCY1 1934 aaKnown RBP11.62□□□□□ -0.55
TRIM59-201ENST00000309784 H7C0C1 242 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TIMP1P01033 207 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CD48P09326 243 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TFE3P19532 575 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ACTN2P35609 894 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ATP5OP48047 213 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 HSP90B2PQ58FF3 399 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ZC3H12AQ5D1E8 599 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ZC3H18Q86VM9 953 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TMEM173Q86WV6 379 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 JAMLQ86YT9 394 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ZNF558Q96NG5 402 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 FEZ2Q9UHY8 353 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TRIM43BA6NCK2 446 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 H7C4K7 107 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 SYN3O14994 580 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TRUB2O95900 331 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MOCS2O96007 188 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 COILP38432 576 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 BOLA3Q53S33 107 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 B4GALNT4Q76KP1 1039 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CCDC33Q8N5R6 958 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 GRK7Q8WTQ7 553 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 RSAD2Q8WXG1 361 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TRIM43Q96BQ3 446 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 RTP3Q9BQQ7 232 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MCOLN1Q9GZU1 580 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CENPHQ9H3R5 247 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MYO7AQ13402 2215 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ABHD14A-ACY1A0A1B0GW23 586 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TCRBV5S1A1TA0A578 114 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 H2AFXP16104 143 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ELF1P32519 619 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MATKP42679 507 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 AARSP49588 968 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 KRT17Q04695 432 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MMRN1Q13201 1228 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CCDC89Q8N998 374 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 GIPC2Q8TF65 315 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 SNRNP25Q9BV90 132 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TMEM59LQ9UK28 342 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ZMYND8Q9ULU4 1186 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 AP4E1Q9UPM8 1137 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 RALGAPA2Q2PPJ7 1873 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CYP11A1P05108 521 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 KDELR1P24390 212 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 OR1D2P34982 312 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 GPR15P49685 360 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 SLC5A3P53794 718 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ACAP1Q15027 740 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 TRADDQ15628 312 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 USP41Q3LFD5 358 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 RTP2Q5QGT7 225 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 LRRC38Q5VT99 294 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 ANKS3Q6ZW76 656 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 HDXQ7Z353 690 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 DPF3Q92784 378 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 CNGB3Q9NQW8 809 aa11.61□□□□□ -0.55
TRIM59-201ENST00000309784 R3HDM2Q9Y2K5 976 aaKnown RBP11.61□□□□□ -0.55
TRIM59-201ENST00000309784 MCF2LO15068 1137 aa11.6□□□□□ -0.55
TRIM59-201ENST00000309784 ITGB8P26012 769 aa11.6□□□□□ -0.55
TRIM59-201ENST00000309784 NOS2P35228 1153 aa11.6□□□□□ -0.55
TRIM59-201ENST00000309784 RDXP35241 583 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms