RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 NUDCD1Q96RS6 583 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 RBM15Q96T37 977 aaKnown RBP eCLIP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 FAM167BQ9BTA0 163 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 TRABDQ9H4I3 376 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 PRMT7Q9NVM4 692 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 SCOCQ9UIL1 159 aa10.78□□□□□ -0.68
APOBEC3F-201ENST00000308521 EXOC1LA0A1B0GW35 172 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 C2CD2LO14523 706 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 ATP6V1G1O75348 118 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 E2F6O75461 281 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 PROSCO94903 275 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 RALAP11233 206 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 GM2AP17900 193 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 CD58P19256 250 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 PCK1P35558 622 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 ENPEPQ07075 957 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 SCARA5Q6ZMJ2 495 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 ZNF677Q86XU0 584 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 KATNAL2Q8IYT4 538 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 LRRC8CQ8TDW0 803 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 TMEM40Q8WWA1 233 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 KCNN1Q92952 543 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 DCLRE1BQ9H816 532 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 PDP2Q9P2J9 529 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 TNFSF13BQ9Y275 285 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 LACTBL1A8MY62 500 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 NDC80O14777 642 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 HGSO14964 777 aaPredicted RBP10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 TSPAN1O60635 241 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 CFHP08603 1231 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 NFICP08651 508 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 AKR1A1P14550 325 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 IDO1P14902 403 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 CCND3P30281 292 aaPredicted RBP10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 CPT1AP50416 773 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 NOP14P78316 857 aaKnown RBP10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 LLGL1Q15334 1064 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 OR52E8Q6IFG1 317 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 TMEM270Q6UE05 265 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 AZIN2Q96A70 460 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 SMC6Q96SB8 1091 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 NDNQ99608 321 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 TUBB6Q9BUF5 446 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 UBE2OQ9C0C9 1292 aaKnown RBP10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 RPF1Q9H9Y2 349 aaKnown RBP10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 SLC24A2Q9UI40 661 aa10.77□□□□□ -0.69
APOBEC3F-201ENST00000308521 NRCAMQ92823 1304 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 DNALI1O14645 258 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 GPR32O75388 356 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 SPAG7O75391 227 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 PURAQ00577 322 aaKnown RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 NOGQ13253 232 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 DUOXA2Q1HG44 320 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 TMEM154Q6P9G4 183 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 DRICH1Q6PGQ1 229 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 RHOT1Q8IXI2 618 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 SMYD1Q8NB12 490 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 RBBP8NLQ8NC74 664 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 EXD1Q8NHP7 514 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 SYT15Q9BQS2 421 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 MIS12Q9H081 205 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 GALNT8Q9NY28 637 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 NXF1Q9UBU9 619 aaKnown RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 COL1A2P08123 1366 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 SIP14410 1827 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 RRN3P2A6NIE6 340 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 TYROBPO43914 113 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 ZC3H11AO75152 810 aaKnown RBP eCLIP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 TMEM191BP0C7N4 346 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 VPS41P49754 854 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 GCNT1Q02742 428 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 ADCY1Q08828 1119 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 FAM47CQ5HY64 1035 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 CATSPER4Q7RTX7 472 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 PASD1Q8IV76 773 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 LRRC43Q8N309 656 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 C7orf31Q8N865 590 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 PTPRN2Q92932 1015 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 APOL6Q9BWW8 343 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 EIF2AQ9BY44 585 aaKnown RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 OSBPL8Q9BZF1 889 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 ADAMTS10Q9H324 1103 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 SAYSD1Q9NPB0 183 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 GRID1Q9ULK0 1009 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 ZMYND8Q9ULU4 1186 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 PCDHB4Q9Y5E5 795 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 MGAMO43451 1857 aa10.76□□□□□ -0.69
APOBEC3F-201ENST00000308521 IGHA2P01877 340 aa10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 CYBAP13498 195 aa10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 EPHB2P29323 1055 aa10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 HOXA11P31270 313 aaPredicted RBP10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 PTDSS1P48651 473 aaKnown RBP10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 PSMD7P51665 324 aa10.75□□□□□ -0.69
APOBEC3F-201ENST00000308521 SP3Q02447 781 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms