RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 TRIM33Q9UPN9 1127 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 AVILO75366 819 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 SUPT3HO75486 399 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 RBL1P28749 1068 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 CPA2P48052 419 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 SERPINB4P48594 390 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 RWDD4Q6NW29 188 aaKnown RBP11.12□□□□□ -0.63
MUC4-201ENST00000308466 HACE1Q8IYU2 909 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 C1orf127Q8N9H9 656 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.12□□□□□ -0.63
MUC4-201ENST00000308466 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 C12orf42Q96LP6 360 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 TMEM237Q96Q45 408 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 SIK2Q9H0K1 926 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 SNCAIPQ9Y6H5 919 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 CXCL11O14625 94 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 ATP9BO43861 1147 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 GRIN3BO60391 1043 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 ARF4P18085 180 aaPredicted RBP11.12□□□□□ -0.63
MUC4-201ENST00000308466 ADORA2AP29274 412 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 ICAM3P32942 547 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 SULT1E1P49888 294 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 DPYSL3Q14195 570 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 EFTUD2Q15029 972 aaKnown RBP eCLIP11.12□□□□□ -0.63
MUC4-201ENST00000308466 LRRC38Q5VT99 294 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 ATG16L1Q676U5 607 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 NLRP9Q7RTR0 991 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 APPL2Q8NEU8 664 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 AGR3Q8TD06 166 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 NUDCD1Q96RS6 583 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 HAPLN2Q9GZV7 340 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 TNFSF13BQ9Y275 285 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 INPP5FQ9Y2H2 1132 aa11.12□□□□□ -0.63
MUC4-201ENST00000308466 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 HMGCRP04035 888 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ERBB2P04626 1255 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 CTSHP09668 335 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 CDKN2BP42772 138 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 RAD23BP54727 409 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ROR2Q01974 943 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 OGDHQ02218 1023 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 MFSD5Q6N075 450 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 ASB7Q9H672 318 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 MINDY3Q9H8M7 445 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 HEY2Q9UBP5 337 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 SLC24A2Q9UI40 661 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 GGA2Q9UJY4 613 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 DRG1Q9Y295 367 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 ATP5HO75947 161 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 SNRPAP09012 282 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 PAEPP09466 180 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 MCF2P10911 925 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 KDSRQ06136 332 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ITKQ08881 620 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 STILQ15468 1287 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 KBTBD12Q3ZCT8 623 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 C9orf131Q5VYM1 1079 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 MTDHQ86UE4 582 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 CCDC125Q86Z20 511 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 AGAP11Q8TF27 550 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 CCT6BQ92526 530 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 B3GNT5Q9BYG0 378 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 VCX3BQ9H321 246 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 VCX3AQ9NNX9 186 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 APOC4-APOC2K7ER74 178 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ZWINTO95229 277 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 APOC2P02655 101 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 GHRP10912 638 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 TYK2P29597 1187 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 FAAP100Q0VG06 881 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 DGKDQ16760 1214 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ANKRD22Q5VYY1 191 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 CWF19L1Q69YN2 538 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 BBS12Q6ZW61 710 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 HIPK4Q8NE63 616 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 ALKBH8Q96BT7 664 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 RXFP1Q9HBX9 757 aa11.11□□□□□ -0.63
MUC4-201ENST00000308466 PAIP2BQ9ULR5 123 aaKnown RBP11.11□□□□□ -0.63
MUC4-201ENST00000308466 AHCYL1O43865 530 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 CYP2B6P20813 491 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 GRIK4Q16099 956 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 KYAT1Q16773 422 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 TRABD2AQ86V40 505 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 ARID3BQ8IVW6 561 aaPredicted RBP11.1□□□□□ -0.63
MUC4-201ENST00000308466 DTX3LQ8TDB6 740 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 TNIP3Q96KP6 325 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 ELOVL4Q9GZR5 314 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.1□□□□□ -0.63
MUC4-201ENST00000308466 UBAP1Q9NZ09 502 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 HMGXB4Q9UGU5 601 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 STAP1Q9ULZ2 295 aa11.1□□□□□ -0.63
MUC4-201ENST00000308466 DLEC1Q9Y238 1755 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms