RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 FAM162AQ96A26 154 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 A1CFQ9NQ94 594 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 DRG1Q9Y295 367 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 DCDC2CA8MYV0 355 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ACKR2O00590 384 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 NCAM2O15394 837 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 MBL2P11226 248 aaPredicted RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 VEGFAP15692 232 aaPredicted RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 CNTN2Q02246 1040 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ITIH4Q14624 930 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 NFE2Q16621 373 aaPredicted RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ZNF280DQ6N043 979 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 ACTL9Q8TC94 416 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 MRPS31Q92665 395 aaKnown RBP16.47■□□□□ 0.23
USP42-201ENST00000306177 PCDH9Q9HC56 1237 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 LRRC4BQ9NT99 713 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 WWOXQ9NZC7 414 aa16.47■□□□□ 0.23
USP42-201ENST00000306177 C16orf96A6NNT2 1141 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 CES2O00748 559 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 AVPR1AP37288 418 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 STX5Q13190 355 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 ZNF268Q14587 947 aaPredicted RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 TMEM132BQ14DG7 1078 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 SGO1Q5FBB7 561 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 MAP4K3Q8IVH8 894 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 TBCBQ99426 244 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 C17orf80Q9BSJ5 609 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 GLIS2Q9BZE0 524 aaPredicted RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 FKBP9O95302 570 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 TFRCP02786 760 aaKnown RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 CYP2F1P24903 491 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 CPA2P48052 419 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 EFEMP1Q12805 493 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 TBX2Q13207 712 aaPredicted RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 FKBP9P1Q75LS8 142 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 ZDHHC17Q8IUH5 632 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 BRSK2Q8IWQ3 736 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 TNIP2Q8NFZ5 429 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 MYCBPAPQ8TBZ2 947 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 SEPT8Q92599 483 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 IARS2Q9NSE4 1012 aaKnown RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 TRPM5Q9NZQ8 1165 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 VPS26AO75436 327 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 SUPT7LO94864 414 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 GLI1P08151 1106 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 NDST1P52848 882 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 SDE2Q6IQ49 451 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 SLC27A1Q6PCB7 646 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 RBBP8Q99708 897 aa16.46■□□□□ 0.23
USP42-201ENST00000306177 DDX43Q9NXZ2 648 aaKnown RBP16.46■□□□□ 0.23
USP42-201ENST00000306177 RAB27AP51159 221 aa16.46■□□□□ 0.22
USP42-201ENST00000306177 ATXN3P54252 364 aaPredicted RBP16.46■□□□□ 0.22
USP42-201ENST00000306177 LRRC74AQ0VAA2 488 aa16.46■□□□□ 0.22
USP42-201ENST00000306177 BHMTQ93088 406 aa16.46■□□□□ 0.22
USP42-201ENST00000306177 PRPF18Q99633 342 aaKnown RBP16.46■□□□□ 0.22
USP42-201ENST00000306177 RUVBL2Q9Y230 463 aaKnown RBP16.46■□□□□ 0.22
USP42-201ENST00000306177 PIK3CDO00329 1044 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 PJA2O43164 708 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 PTPRAP18433 802 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 ERMARDQ5T6L9 678 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SH3RF1Q7Z6J0 888 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 DNAAF5Q86Y56 855 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SYT15Q9BQS2 421 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 ZBTB39O15060 712 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 KLC1Q07866 573 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 NLRP9Q7RTR0 991 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 TMEM161AQ9NX61 479 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 RNF112Q9ULX5 631 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SUFUQ9UMX1 484 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 MYO1GB0I1T2 1018 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 TBC1D4O60343 1298 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 JCHAINP01591 159 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 DMC1Q14565 340 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SUGP1Q8IWZ8 645 aaKnown RBP16.45■□□□□ 0.22
USP42-201ENST00000306177 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP42-201ENST00000306177 HASPINQ8TF76 798 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 DNAJC9Q8WXX5 260 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 DCLK3Q9C098 648 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 BRD8Q9H0E9 1235 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 ZNF556Q9HAH1 456 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 IL1RL2Q9HB29 575 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
USP42-201ENST00000306177 HEY2Q9UBP5 337 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 BLOC1S6Q9UL45 172 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 FZD1Q9UP38 647 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SLC12A8A0AV02 714 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 CASTOR2A6NHX0 329 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 EVPLLA8MZ36 301 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 TM4SF1P30408 202 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 PPATQ06203 517 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 HIST2H2ACQ16777 129 aaPredicted RBP16.45■□□□□ 0.22
USP42-201ENST00000306177 HIST2H2AA3Q6FI13 130 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 LAYNQ6UX15 382 aa16.45■□□□□ 0.22
USP42-201ENST00000306177 SHOC2Q9UQ13 582 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms