RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CYFIP2Q96F07 1278 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 ZFRQ96KR1 1074 aaKnown RBP17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 PNKPQ96T60 521 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 TSG101Q99816 390 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 FAM49BQ9NUQ9 324 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 GMIPQ9P107 970 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 PCDHGA5Q9Y5G8 931 aa17.62■□□□□ 0.41
TRAPPC1-201ENST00000303731 EML5Q05BV3 1969 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 TLR5O60602 858 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 CILPO75339 1184 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 APODP05090 189 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 ADH5P11766 374 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 MXI1P50539 228 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 GAD2Q05329 585 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 GAB4Q2WGN9 574 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 BTBD8Q5XKL5 378 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 RHBDF2Q6PJF5 856 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 PRR23CQ6ZRP0 262 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 CLEC20AQ6ZU45 233 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 NUDT18Q6ZVK8 323 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 TADA2BQ86TJ2 420 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 FBXL13Q8NEE6 735 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 USP33Q8TEY7 942 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 ELMO3Q96BJ8 720 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 ZC3H10Q96K80 434 aaKnown RBP17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 HHIPQ96QV1 700 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 CCSER2Q9H7U1 834 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 APOBEC3GQ9HC16 384 aaKnown RBP17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 SCML2Q9UQR0 700 aa17.61■□□□□ 0.41
TRAPPC1-201ENST00000303731 A0A0A0MRY4 1105 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 K7EQS6 105 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 SLC16A3O15427 465 aaKnown RBP17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 BEST1O76090 585 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 EPN2O95208 641 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 ADORA2BP29275 332 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 GRIA2P42262 883 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 PXNP49023 591 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 PSEN1P49768 467 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 ORC1Q13415 861 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 PNOCQ13519 176 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 ZNF658Q5TYW1 1059 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 KLHDC10Q6PID8 442 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 TSTD1Q8NFU3 115 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 MMRN2Q9H8L6 949 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 CYLDQ9NQC7 956 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 MMP17Q9ULZ9 603 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 MYOFQ9NZM1 2061 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 SDK1Q7Z5N4 2213 aa17.6■□□□□ 0.41
TRAPPC1-201ENST00000303731 HOXC11O43248 304 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 RHOBTB1O94844 696 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 KAT7O95251 611 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 CD58P19256 250 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 ATP5C1P36542 298 aaKnown RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 TNFRSF4P43489 277 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 DGKEP52429 567 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 ATXN1P54253 815 aaKnown RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 FKBP3Q00688 224 aaKnown RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 LRRC63Q05C16 580 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 ELF2Q15723 593 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 ZNF276Q8N554 614 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 KCNV2Q8TDN2 545 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 TWNKQ96RR1 684 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 CDK5RAP1Q96SZ6 601 aaKnown RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 LSM7Q9UK45 103 aaKnown RBP17.59■□□□□ 0.41
TRAPPC1-201ENST00000303731 NCOR2Q9Y618 2525 aa17.58■□□□□ 0.41
TRAPPC1-201ENST00000303731 HHLA1C9JL84 531 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 ALDH1A2O94788 518 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 ACO1P21399 889 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 PPP1R2P41236 205 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 PRCPP42785 496 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SLC8A3P57103 927 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 C2orf27AQ580R0 203 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 LY6G5CQ5SRR4 150 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 HTR3DQ70Z44 454 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 TRMT11Q7Z4G4 463 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 KBTBD6Q86V97 674 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SMYD4Q8IYR2 804 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SPATA20Q8TB22 786 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 WHAMMQ8TF30 809 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SMARCE1Q969G3 411 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 CNOT6LQ96LI5 555 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 DUSP16Q9BY84 665 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 ARHGEF4Q9NR80 690 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SPHK2Q9NRA0 654 aa17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.58■□□□□ 0.4
TRAPPC1-201ENST00000303731 SLC30A4O14863 429 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 ZNF806P0C7X5 589 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 HOXC13P31276 330 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 KIF11P52732 1056 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 SEC13P55735 322 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 STIM1Q13586 685 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 CRY1Q16526 586 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 PLK5Q496M5 336 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 EOGTQ5NDL2 527 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 CCDC186Q7Z3E2 898 aa17.57■□□□□ 0.4
TRAPPC1-201ENST00000303731 RASSF3Q86WH2 238 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms