RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 LGALS2P05162 132 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 T-ENOLP0DO92 83 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 TFE3P19532 575 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 RBL1P28749 1068 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PTK7Q13308 1070 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 GOLGA7BQ2TAP0 167 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 CCDC14Q49A88 953 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 TAF1BQ53T94 588 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
HIF3A-204ENST00000300862 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 LRRC6Q86X45 466 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 KIF12Q96FN5 646 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 MIS12Q9H081 205 aa13.44□□□□□ -0.26
HIF3A-204ENST00000300862 CYP2C8P10632 490 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 MCF2P10911 925 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 IL4RP24394 825 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 PCK1P35558 622 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CCDC15Q0P6D6 951 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 TMEM62Q0P6H9 643 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 RASA2Q15283 850 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 MTDHQ86UE4 582 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CTAGE3PQ8IX95 158 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 AFG1LQ8WV93 481 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 RNF157Q96PX1 679 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 FRMD8P1Q9BZ68 369 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 USP29Q9HBJ7 922 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 NR2E3Q9Y5X4 410 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 A0A0G2JND7 137 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 EME2A4GXA9 379 aaPredicted RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 C2orf71A6NGG8 1288 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 NDC80O14777 642 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 LPXNO60711 386 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 PYGBP11216 843 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ATP2A2P16615 1042 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ALDH3A1P30838 453 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 IREB2P48200 963 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 SLC26A2P50443 739 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ATXN1P54253 815 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ARHGAP1Q07960 439 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CAPRIN2Q6IMN6 1127 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ARMCX2Q7L311 632 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 NLRP9Q7RTR0 991 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 ERO1BQ86YB8 467 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CCDC110Q8TBZ0 833 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 MICAL1Q8TDZ2 1067 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 FAM172AQ8WUF8 416 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 TTC17Q96AE7 1141 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 FAM111AQ96PZ2 611 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CYTH2Q99418 400 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
HIF3A-204ENST00000300862 CYP3A43Q9HB55 503 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 TXLNGQ9NUQ3 528 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 TEX264Q9Y6I9 313 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
HIF3A-204ENST00000300862 A0A0G2JMZ2 1700 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 LRRC37A2A6NM11 1700 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 CXorf49A8MYA2 514 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 F5H423 210 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 ENDOD1O94919 500 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 APRTP07741 180 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 NEFHP12036 1026 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 P4HA1P13674 534 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 BLMHQ13867 455 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 KCNJ11Q14654 390 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 C11orf91Q3C1V1 193 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 PQLC3Q8N755 202 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 PPM1NQ8N819 430 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 PCDH19Q8TAB3 1148 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 KCNV2Q8TDN2 545 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 NT5C1AQ9BXI3 368 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 ASB7Q9H672 318 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 PPCSQ9HAB8 311 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 HES2Q9Y543 173 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 NME7Q9Y5B8 376 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 SNX9Q9Y5X1 595 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 UGT1A9O60656 530 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 GABBR2O75899 941 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 INHBAP08476 426 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 ATICP31939 592 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 STIP1P31948 543 aaKnown RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 PEX19P40855 299 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 BCAR1P56945 870 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 RBP5P82980 135 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 TNFAIP2Q03169 654 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 LCLAT1Q6UWP7 414 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 ACAP3Q96P50 834 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 UGT1A7Q9HAW7 530 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 UGT1A10Q9HAW8 530 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms