RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 MKL1Q969V6 931 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 CNPY3Q9BT09 278 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 OLA1Q9NTK5 396 aaKnown RBP15.32■□□□□ 0.04
CDH23-202ENST00000299366 UTP6Q9NYH9 597 aaKnown RBP15.32■□□□□ 0.04
CDH23-202ENST00000299366 ZNF711Q9Y462 761 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 WDR27A2RRH5 827 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 LACTBL1A8MY62 500 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 SNX2O60749 519 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 FRA10AC1Q70Z53 315 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 SLC26A11Q86WA9 606 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 JOSD2Q8TAC2 188 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 DIS3LQ8TF46 1054 aaKnown RBP15.32■□□□□ 0.04
CDH23-202ENST00000299366 CNBD2Q96M20 576 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 MAN1C1Q9NR34 630 aa15.32■□□□□ 0.04
CDH23-202ENST00000299366 ASB14A6NK59 587 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 AP1G2O75843 785 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 SUPT7LO94864 414 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ZFXP17010 805 aaPredicted RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 XPAP23025 273 aaPredicted RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 CYP2F1P24903 491 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 SPRP35270 261 aaPredicted RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 SNX30Q5VWJ9 437 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 SLC30A9Q6PML9 568 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 KCNT2Q6UVM3 1135 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 IZUMO2Q6UXV1 221 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 STRA8Q7Z7C7 330 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 PHF21BQ96EK2 531 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 NR2E3Q9Y5X4 410 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 CASTOR2A6NHX0 329 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ADM5C9JUS6 153 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 DCXO43602 365 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 NFICP08651 508 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 COPAP53621 1224 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ZNF235Q14590 738 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 KPNB1Q14974 876 aaKnown RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 ZC3H12AQ5D1E8 599 aaKnown RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 OLFML2BQ68BL8 750 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ITPRIPL1Q6GPH6 555 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 VSIG10LQ86VR7 867 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 SCG3Q8WXD2 468 aaKnown RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 CAAP1Q9H8G2 361 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ARHGEF38Q9NXL2 777 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 ANKRD12Q6UB98 2062 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 LRRC37A3O60309 1634 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 H3BRB1 525 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 CHEK2O96017 543 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 MGAT1P26572 445 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 N4BP2L1Q5TBK1 243 aaPredicted RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 KIAA0319LQ8IZA0 1049 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 COLGALT1Q8NBJ5 622 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 TUT1Q9H6E5 874 aaKnown RBP15.31■□□□□ 0.04
CDH23-202ENST00000299366 PCDH9Q9HC56 1237 aa15.31■□□□□ 0.04
CDH23-202ENST00000299366 C2CD2LO14523 706 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 PFDN6O15212 129 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 FAM155BO75949 473 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 CYP3A4P08684 503 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 CCDC130P13994 396 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 RPL22P35268 128 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 DEFB107AQ8IZN7 70 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 THEM5Q8N1Q8 247 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 PYDC1Q8WXC3 89 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 MTFR1LQ9H019 292 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 SPATC1LQ9H0A9 340 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDH23-202ENST00000299366 DNAJC8O75937 253 aaPredicted RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 MICAL2O94851 1124 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 UBA1P22314 1058 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 IRX1P78414 480 aaPredicted RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 LRRC57Q8N9N7 239 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 ULK4Q96C45 1275 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 B3GNT5Q9BYG0 378 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 IRAK4Q9NWZ3 460 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 CCL15-CCL14A0A0B4J2E2 113 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 SMNDC1O75940 238 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDH23-202ENST00000299366 ERVK-10P10266 1014 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 VHLP40337 213 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 FLOT2Q14254 428 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 CCL15Q16663 113 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 ASTE1Q2TB18 679 aaPredicted RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 RARS2Q5T160 578 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 TFAP2DQ7Z6R9 452 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 UNC45BQ8IWX7 931 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 SCUBE1Q8IWY4 988 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 RIBC1Q8N443 379 aaPredicted RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 RNF217Q8TC41 542 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 BLOC1S5Q8TDH9 187 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 SNRNP27Q8WVK2 155 aaKnown RBP15.3■□□□□ 0.04
CDH23-202ENST00000299366 MARK4Q96L34 752 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 BATF3Q9NR55 127 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 FER1L4A9Z1Z3 1794 aa15.3■□□□□ 0.04
CDH23-202ENST00000299366 CYP3A7-CYP3A51PA0A087WV96 503 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms