RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 OGDHQ02218 1023 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 PPP6R3Q5H9R7 873 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 B3GNT6Q6ZMB0 384 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 NAT8LQ8N9F0 302 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM143Q96AN5 459 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 MFSD14AQ96MC6 490 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 POLR3FQ9H1D9 316 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 RAVER2Q9HCJ3 691 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 TBC1D22BQ9NU19 505 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 HBS1LQ9Y450 684 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SPATA31A5Q5VU36 1347 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SPATA31A6Q5VVP1 1343 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SPATA31A7Q8IWB4 1347 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ATAD5Q96QE3 1844 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 MYOCOSA0A1B0GUC4 107 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ARHGAP10A1A4S6 786 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 NEMP1O14524 444 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SERPINA6P08185 405 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 RARS2Q5T160 578 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 NDUFA13Q9P0J0 144 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ADAMTS6Q9UKP5 1117 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 MAGED2Q9UNF1 606 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 SHANK3Q9BYB0 1731 aa11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ASTN2O75129 1339 aaPredicted RBP11.84□□□□□ -0.51
TRUB1-201ENST00000298746 ATP6V1G1O75348 118 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 GRAP2O75791 330 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 SRGAP2CP0DJJ0 459 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 SRGAP2BP0DMP2 458 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 MMP8P22894 467 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 MMRN1Q13201 1228 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 PPP2R5DQ14738 602 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 ANKRD20A4Q4UJ75 823 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 VWA5B1Q5TIE3 1220 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 PDSS2Q86YH6 399 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 CMTM5Q96DZ9 223 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 C8orf37Q96NL8 207 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 RMDN3Q96TC7 470 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 KLC2Q9H0B6 622 aa11.83□□□□□ -0.51
TRUB1-201ENST00000298746 PIH1D1Q9NWS0 290 aaKnown RBP11.83□□□□□ -0.51
TRUB1-201ENST00000298746 CXorf49A8MYA2 514 aaPredicted RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 EXTL3O43909 919 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 MRPS22P82650 360 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 MYBPC3Q14896 1274 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 TBCCQ15814 346 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 ZACNQ401N2 412 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 DPY19L2Q6NUT2 758 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 DRICH1Q6PGQ1 229 aaPredicted RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 SH3BP5LQ7L8J4 393 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 STKLD1Q8NE28 680 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 SLC35B2Q8TB61 432 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 APOBEC3GQ9HC16 384 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 GPAMQ9HCL2 828 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 SH3BP1Q9Y3L3 701 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 H0YIN7 160 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 PEX1O43933 1283 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 ASLP04424 464 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 PABPC4LP0CB38 370 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 SAT1P21673 171 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 SERPINB5P36952 375 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 ALDH1A3P47895 512 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 NUDT2P50583 147 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 ZC3H12AQ5D1E8 599 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 TMCO4Q5TGY1 634 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 PDPK2PQ6A1A2 396 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 KLC3Q6P597 504 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 PIWIL2Q8TC59 973 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 AGO4Q9HCK5 861 aaKnown RBP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.83□□□□□ -0.52
TRUB1-201ENST00000298746 ARFGEF1Q9Y6D6 1849 aa11.83□□□□□ -0.52
TRUB1-201ENST00000298746 GOLGA8QA0A0J9YX86 632 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 GOLGA8OA6NCC3 632 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 GOLGA8NF8WBI6 632 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 HSPA4LO95757 839 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 KDELR1P24390 212 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 ETV4P43268 484 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 TAF5Q15542 800 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 PPP1R2P3Q6NXS1 205 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 OR5B17Q8NGF7 314 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 C7orf26Q96N11 449 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 CATSPER2Q96P56 530 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 TAAR1Q96RJ0 339 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 TBC1D12O60347 775 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 SUPT3HO75486 399 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 SPAG6O75602 509 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 NELFEP18615 380 aaKnown RBP11.82□□□□□ -0.52
TRUB1-201ENST00000298746 RXRBP28702 533 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 SLC1A6P48664 564 aa11.82□□□□□ -0.52
TRUB1-201ENST00000298746 BCAR1P56945 870 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms