RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 WDR41Q9HAD4 459 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 KLC4Q9NSK0 619 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 TDRKHQ9Y2W6 561 aaKnown RBP12.45□□□□□ -0.42
PCF11-201ENST00000298281 NEU2Q9Y3R4 380 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 CEP170Q5SW79 1584 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 PDX1P52945 283 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 AGBL2Q5U5Z8 902 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 CYP4X1Q8N118 509 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 ERLEC1Q96DZ1 483 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 RNF112Q9ULX5 631 aa12.45□□□□□ -0.42
PCF11-201ENST00000298281 PDS5AQ29RF7 1337 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 A0A1W2PRG6 482 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 RRN3P2A6NIE6 340 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 TIMM44O43615 452 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 EPN2O95208 641 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 NUMBP49757 651 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 ARMC3Q5W041 872 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 PYHIN1Q6K0P9 492 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SLC35C2Q9NQQ7 365 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 COMMD9Q9P000 198 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 ESYT3A0FGR9 886 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 HS6ST1O60243 411 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 VPS4BO75351 444 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CPSF4O95639 269 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 TMEM62Q0P6H9 643 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 LRRC14Q15048 493 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 C4orf46Q504U0 113 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SIRT2Q8IXJ6 389 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CRELD1Q96HD1 420 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 POLR1BQ9H9Y6 1135 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 PRKAG3Q9UGI9 489 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 TUBGCP4Q9UGJ1 667 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 MEI4A8MW99 385 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CHP2O43745 196 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 ABCB1P08183 1280 aaPredicted RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 STARD3Q14849 445 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 EZH2Q15910 746 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 VPS35Q96QK1 796 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 TINF2Q9BSI4 451 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 FAM50BQ9Y247 325 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CITO14578 2027 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 LSP1P33241 339 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 MDH1P40925 334 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 LGALS3BPQ08380 585 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 DAB2IPQ5VWQ8 1189 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SLC7A14Q8TBB6 771 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CLIP3Q96DZ5 547 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 GOLPH3Q9H4A6 298 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 CAB39LQ9H9S4 337 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 GPN3Q9UHW5 284 aaPredicted RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 SPATA31A3Q5VYP0 1347 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 NCK2O43639 380 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 KHDRBS3O75525 346 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 PPP2R1BP30154 601 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 KBTBD12Q3ZCT8 623 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 WLSQ5T9L3 541 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 GPR101Q96P66 508 aaPredicted RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 TRMT6Q9UJA5 497 aaKnown RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 IFNA14P01570 189 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 SNAPC2Q13487 334 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 TTC39BQ5VTQ0 682 aaPredicted RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 CCDC126Q96EE4 140 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 FRMD8P1Q9BZ68 369 aaPredicted RBP12.44□□□□□ -0.42
PCF11-201ENST00000298281 IGSF9BQ9UPX0 1349 aa12.44□□□□□ -0.42
PCF11-201ENST00000298281 ANXA9O76027 345 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 RPLP2P05387 115 aaKnown RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 IGKV5-2P06315 115 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 LYNP07948 512 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 PAICSP22234 425 aaKnown RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 CASP1P29466 404 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 SKIV2L2P42285 1042 aaKnown RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 HSPA13P48723 471 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 NUDT2P50583 147 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 TCEA2Q15560 299 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 METTL21CQ5VZV1 264 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 RDM1Q8NG50 284 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 SLC35G2Q8TBE7 412 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 C17orf75Q9HAS0 396 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 TRPC5OSA6NMA1 111 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 SLC25A12O75746 678 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 ITGA4P13612 1032 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 STXBP1P61764 594 aaKnown RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 CENPCQ03188 943 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 DGKDQ16760 1214 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 CACHD1Q5VU97 1274 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 RASSF6Q6ZTQ3 369 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 FAM20CQ8IXL6 584 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 NCF1BA6NI72 391 aaPredicted RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 NCF1CA8MVU1 366 aaPredicted RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 CTSEP14091 401 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 NCF1P14598 390 aaPredicted RBP12.43□□□□□ -0.42
PCF11-201ENST00000298281 FGFR4P22455 802 aa12.43□□□□□ -0.42
PCF11-201ENST00000298281 FAM83EQ2M2I3 478 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms