RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 MRNIPQ6NTE8 343 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 ZPBP2Q6X784 338 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 C1orf186Q6ZWK4 172 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 RRM2BQ7LG56 351 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 SEPT8Q92599 483 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 EDEM1Q92611 657 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 C5orf58C9J3I9 102 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 SOAT2O75908 522 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 CASP5P51878 434 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 ADIGQ0VDE8 80 aa17.81■□□□□ 0.44
CDCP1-201ENST00000296129 TRPC5OSA6NMA1 111 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 RPLP2P05387 115 aaKnown RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ATN1P54259 1190 aaPredicted RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 CDH8P55286 799 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 RPL10AP62906 217 aaKnown RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 DLG4P78352 724 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 EVX2Q03828 476 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 POLD3Q15054 466 aaPredicted RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 UGT3A1Q6NUS8 523 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 HAS1Q92839 578 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 VPS9D1Q9Y2B5 631 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ZNF280DQ6N043 979 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 TAGAPQ8N103 731 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 COLGALT1Q8NBJ5 622 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ARRDC4Q8NCT1 418 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ACTL9Q8TC94 416 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 L1RE1Q9UN81 338 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 TRIM66O15016 1216 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 PSMD10O75832 226 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 IL17AQ16552 155 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 CCDC60Q8IWA6 550 aaPredicted RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 FAM162AQ96A26 154 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 RNF112Q9ULX5 631 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 SHPRHQ149N8 1683 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 MEIS2O14770 477 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 JCHAINP01591 159 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 CAVIN3Q969G5 261 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 OLFM3Q96PB7 478 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ENTPD7Q9NQZ7 604 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 WWOXQ9NZC7 414 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 PIK3CDO00329 1044 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 ENDOD1O94919 500 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 PYGMP11217 842 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 GLRBP48167 497 aa17.8■□□□□ 0.44
CDCP1-201ENST00000296129 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
CDCP1-201ENST00000296129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 STRA8Q7Z7C7 330 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 LRRN4CLQ8ND94 238 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 WDR18Q9BV38 432 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ILKAPQ9H0C8 392 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ADNPQ9H2P0 1102 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 UBP1Q9NZI7 540 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 NCF1BA6NI72 391 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 NCF1CA8MVU1 366 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 NCF1P14598 390 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 UBA1P22314 1058 aaKnown RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 NFIL3Q16649 462 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 CATSPERGQ6ZRH7 1159 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 KAT2BQ92831 832 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ASB7Q9H672 318 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 SKAP2O75563 359 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 C16orf87Q6PH81 154 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 EFL1Q7Z2Z2 1120 aaKnown RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 PURBQ96QR8 312 aaKnown RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 TRPM5Q9NZQ8 1165 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 MYO1GB0I1T2 1018 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 TIMM44O43615 452 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ZNF268Q14587 947 aaPredicted RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ZNF410Q86VK4 478 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 MRPS31Q92665 395 aaKnown RBP17.79■□□□□ 0.44
CDCP1-201ENST00000296129 EME1Q96AY2 570 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 ABHD16BQ9H3Z7 469 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 CHST12Q9NRB3 414 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 GID8Q9NWU2 228 aa17.79■□□□□ 0.44
CDCP1-201ENST00000296129 URODP06132 367 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 OVOS1Q6IE37 1185 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PTF1AQ7RTS3 328 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 GJB6O95452 261 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 KRT16P08779 473 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PSEN2P49810 448 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 DEFB128Q7Z7B8 93 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 SETD3Q86TU7 594 aaPredicted RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PCDH9Q9HC56 1237 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PCDHA3Q9Y5H8 950 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 H2AFYO75367 372 aaKnown RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 SUPT7LO94864 414 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 CELF6Q96J87 481 aaKnown RBP17.78■□□□□ 0.44
CDCP1-201ENST00000296129 HEY2Q9UBP5 337 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 SIK3Q9Y2K2 1263 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 PLSCR1O15162 318 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 LGALS2P05162 132 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 RAB27AP51159 221 aa17.78■□□□□ 0.44
CDCP1-201ENST00000296129 LRRC74AQ0VAA2 488 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms