RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 C4orf22Q6V702 233 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TTC30AQ86WT1 665 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 PPIL6Q8IXY8 311 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 MYCBPAPQ8TBZ2 947 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 P3H4Q92791 437 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
CLRN1-201ENST00000295911 CCT8L2Q96SF2 557 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TMEM121Q9BTD3 319 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
CLRN1-201ENST00000295911 CALN1Q9BXU9 219 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 UPF3AQ9H1J1 476 aaKnown RBP9.66□□□□□ -0.86
CLRN1-201ENST00000295911 CXCL16Q9H2A7 254 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 PRDM16Q9HAZ2 1276 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 KLK14Q9P0G3 267 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 LGALS13Q9UHV8 139 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TRPV2Q9Y5S1 764 aa9.66□□□□□ -0.86
CLRN1-201ENST00000295911 ATXN2Q99700 1313 aaKnown RBP9.66□□□□□ -0.86
CLRN1-201ENST00000295911 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 CFAP69A5D8W1 941 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SMIM23A6NLE4 172 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 DCDC2CA8MYV0 355 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ALOX15BO15296 676 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 IFNB1P01574 187 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 C6orf222P0C671 652 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 TSHRP16473 764 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ZFXP17010 805 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 TGM2P21980 687 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SLC19A1P41440 591 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 TM4SF4P48230 202 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 RGS7P49802 495 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 LILRA4P59901 499 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 DYNLT1P63172 113 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 IFI35P80217 286 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 DPYSL3Q14195 570 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 GNASQ5JWF2 1037 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ERMARDQ5T6L9 678 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 FOXR1Q6PIV2 292 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SLC26A9Q7LBE3 791 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 RPAINQ86UA6 219 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ADGRF2Q8IZF7 708 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SMG8Q8ND04 991 aaKnown RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 UHMK1Q8TAS1 419 aaKnown RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SPATA18Q8TC71 538 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ZNF473Q8WTR7 871 aaKnown RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 FAM172AQ8WUF8 416 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 KBTBD7Q8WVZ9 684 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 LENG1Q96BZ8 264 aaPredicted RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 HAUS1Q96CS2 278 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 RNF157Q96PX1 679 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 XPO6Q96QU8 1125 aaKnown RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SELENOSQ9BQE4 189 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 SAYSD1Q9NPB0 183 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 PPANQ9NQ55 473 aaKnown RBP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLRN1-201ENST00000295911 GTF2IRD1Q9UHL9 959 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 ACTL7BQ9Y614 415 aa9.65□□□□□ -0.86
CLRN1-201ENST00000295911 APOL1O14791 398 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 XPO1O14980 1071 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 GPR182O15218 404 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PAPSS1O43252 624 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CA12O43570 354 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CD48P09326 243 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PDGFRBP09619 1106 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 ZSCAN5DPP0CG00 497 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 RBP3P10745 1247 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 ETS1P14921 441 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CHN1P15882 459 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PECAM1P16284 738 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PAX3P23760 479 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PHBP35232 272 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 SLCO1A2P46721 670 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 ARL4CP56559 192 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 ROR1Q01973 937 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CRHR2Q13324 411 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 NOMO1Q15155 1222 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 HIF1AQ16665 826 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CDO1Q16878 200 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 LONRF1Q17RB8 773 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 C15orf59Q2T9L4 293 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 TRNP1Q6NT89 227 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 SCYL2Q6P3W7 929 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 DARS2Q6PI48 645 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PPP1R21Q6ZMI0 780 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CYP4V2Q6ZWL3 525 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 SRLQ86TD4 932 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 FAM228AQ86W67 206 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 TDRPQ86YL5 185 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 GLIS1Q8NBF1 620 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 CENPIQ92674 756 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PRCCQ92733 491 aaPredicted RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 ARHGEF2Q92974 986 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PPP1R10Q96QC0 940 aaKnown RBP9.65□□□□□ -0.87
CLRN1-201ENST00000295911 PEBP4Q96S96 227 aa9.65□□□□□ -0.87
CLRN1-201ENST00000295911 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms