RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CYP1A2P05177 515 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 CSH1P0DML2 217 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 CSH2P0DML3 217 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 RPL7AP62424 266 aaKnown RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 NTHL1P78549 312 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 DLX2Q07687 328 aaPredicted RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 CCDC85BQ15834 202 aaPredicted RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 DNAJC24Q6P3W2 148 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 SCD5Q86SK9 330 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 REXO1L1PQ8IX06 675 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 EFHBQ8N7U6 833 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 SLC35G2Q8TBE7 412 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 FAM149B1Q96BN6 582 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 ZNF512Q96ME7 567 aaPredicted RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 NUP85Q9BW27 656 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 L2HGDHQ9H9P8 463 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 LZTFL1Q9NQ48 299 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 CNGB3Q9NQW8 809 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 OSER1Q9NX31 292 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 NUDT5Q9UKK9 219 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 SCML2Q9UQR0 700 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 MYO16Q9Y6X6 1858 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 A0A1W2PQH9 124 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 POU3F3P20264 500 aaPredicted RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 ARHGAP25P42331 645 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 SNX16P57768 344 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 ADAM15Q13444 863 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 RARS2Q5T160 578 aaKnown RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 PLEKHA7Q6IQ23 1121 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 TRNP1Q6NT89 227 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 C3orf20Q8ND61 904 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 EDEM1Q92611 657 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 ZNF707Q96C28 371 aaPredicted RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 GUCD1Q96NT3 240 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 SELENOOQ9BVL4 669 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 TTLL2Q9BWV7 592 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 FBXO44Q9H4M3 255 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 CTTNBP2NLQ9P2B4 639 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 DNMT3BQ9UBC3 853 aaKnown RBP15.89■□□□□ 0.13
CCDC140-201ENST00000295226 INTUQ9ULD6 942 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 STRIP2Q9ULQ0 834 aa15.89■□□□□ 0.13
CCDC140-201ENST00000295226 BUB1O43683 1085 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 FBXO21O94952 628 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 C1RP00736 705 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 MYBL1P10243 752 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 KRT3P12035 628 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 GJA1P17302 382 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 RFC1P35251 1148 aaPredicted RBP15.88■□□□□ 0.13
CCDC140-201ENST00000295226 BSPRYQ5W0U4 402 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 GRASPQ7Z6J2 395 aaPredicted RBP15.88■□□□□ 0.13
CCDC140-201ENST00000295226 HDAC7Q8WUI4 952 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 PPM1EQ8WY54 764 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 CASP10Q92851 521 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 TRIM11Q96F44 468 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 MCEEQ96PE7 176 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 LRRC3Q9BY71 257 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 PRKD2Q9BZL6 878 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 LUC7LQ9NQ29 371 aaKnown RBP15.88■□□□□ 0.13
CCDC140-201ENST00000295226 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 CLDND1Q9NY35 253 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 WDR35Q9P2L0 1181 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 NAALADL1Q9UQQ1 740 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 PRUNE2Q8WUY3 3088 aa15.88■□□□□ 0.13
CCDC140-201ENST00000295226 C5orf42Q9H799 3197 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 NCANO14594 1321 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 FAM92AA1XBS5 289 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 MACROD2A1Z1Q3 448 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 SIGLEC16A6NMB1 481 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 PJA2O43164 708 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 SLU7O95391 586 aaKnown RBP15.87■□□□□ 0.13
CCDC140-201ENST00000295226 FYNP06241 537 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 MYL4P12829 197 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 FLT3P36888 993 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 CCR2P41597 374 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 NOP2P46087 812 aaKnown RBP15.87■□□□□ 0.13
CCDC140-201ENST00000295226 YWHAGP61981 247 aaKnown RBP eCLIP15.87■□□□□ 0.13
CCDC140-201ENST00000295226 OGDHQ02218 1023 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 KIF5AQ12840 1032 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 PPP1R15BQ5SWA1 713 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 SYCE2Q6PIF2 218 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 SYT10Q6XYQ8 523 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 TMEM150AQ86TG1 271 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 ITIH5Q86UX2 942 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 TMC8Q8IU68 726 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 ELMOD1Q8N336 334 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 MYRFLQ96LU7 910 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 IL21Q9HBE4 155 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 AVENQ9NQS1 362 aaPredicted RBP15.87■□□□□ 0.13
CCDC140-201ENST00000295226 ZDHHC7Q9NXF8 308 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 CLEC1BQ9P126 229 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 GUCA1BQ9UMX6 200 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 ASB3Q9Y575 518 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 BRWD1Q9NSI6 2320 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 NOTCH4Q99466 2003 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 XIRP2A4UGR9 3374 aa15.87■□□□□ 0.13
CCDC140-201ENST00000295226 TBX10O75333 385 aa15.86■□□□□ 0.13
CCDC140-201ENST00000295226 TADA3O75528 432 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms