RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 ARHGAP29Q52LW3 1261 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 PPP1R15BQ5SWA1 713 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 FAM102AQ5T9C2 384 aaPredicted RBP18.67■□□□□ 0.58
CCDC78-201ENST00000293889 CCDC149Q6ZUS6 474 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 DENND5BQ6ZUT9 1274 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 KRT222Q8N1A0 295 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 PPM1EQ8WY54 764 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 CEP295NLQ96MC4 621 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 OSGEPQ9NPF4 335 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 IL37Q9NZH6 218 aa18.67■□□□□ 0.58
CCDC78-201ENST00000293889 MACROD2A1Z1Q3 448 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 DAOAP59103 153 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 MRPS5P82675 430 aaKnown RBP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 TUBB2AQ13885 445 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 TCEAL1Q15170 157 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 TAF5Q15542 800 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 DUSP6Q16828 381 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 PM20D1Q6GTS8 502 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 RHOT2Q8IXI1 618 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 MAFAQ8NHW3 353 aaPredicted RBP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 KHSRPQ92945 711 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 TUBB2BQ9BVA1 445 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 SELENOOQ9BVL4 669 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 MRPL47Q9HD33 250 aaKnown RBP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 METTL5Q9NRN9 209 aaKnown RBP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 UVRAGQ9P2Y5 699 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 SCINQ9Y6U3 715 aa18.66■□□□□ 0.58
CCDC78-201ENST00000293889 MTCL1Q9Y4B5 1905 aaKnown RBP18.66■□□□□ 0.58
CCDC78-201ENST00000293889 XIRP2A4UGR9 3374 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 SIGLEC16A6NMB1 481 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 BUB1O43683 1085 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 RTN3O95197 1032 aaPredicted RBP18.65■□□□□ 0.58
CCDC78-201ENST00000293889 C8AP07357 584 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 KRT3P12035 628 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 CASQ1P31415 396 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 NOP2P46087 812 aaKnown RBP18.65■□□□□ 0.58
CCDC78-201ENST00000293889 RPL7AP62424 266 aaKnown RBP18.65■□□□□ 0.58
CCDC78-201ENST00000293889 BHLHA9Q7RTU4 235 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 FBXO44Q9H4M3 255 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 IGFLR1Q9H665 355 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 MAN1C1Q9NR34 630 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 MRFAP1Q9Y605 127 aa18.65■□□□□ 0.58
CCDC78-201ENST00000293889 LINC01565O15544 149 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 GRAP2O75791 330 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 MTA2O94776 668 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 YWHAQP27348 245 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 SCNN1AP37088 669 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 EPHB3P54753 998 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 RNASE9P60153 205 aaKnown RBP18.64■□□□□ 0.57
CCDC78-201ENST00000293889 EFHC1Q5JVL4 640 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 SLC26A9Q7LBE3 791 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 SCML4Q8N228 414 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 LRRN4CLQ8ND94 238 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 VN1R2Q8NFZ6 395 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 JOSD2Q8TAC2 188 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF564Q8TBZ8 553 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-201ENST00000293889 IRGQQ8WZA9 623 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 UBXN4Q92575 508 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 MCEEQ96PE7 176 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 TRIM7Q9C029 511 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 PLEKHA4Q9H4M7 779 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 ZNF446Q9NWS9 450 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 COMMD8Q9NX08 183 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.64■□□□□ 0.57
CCDC78-201ENST00000293889 TMEM59LQ9UK28 342 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 SCML2Q9UQR0 700 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 HCFC2Q9Y5Z7 792 aa18.64■□□□□ 0.57
CCDC78-201ENST00000293889 V9GYY5 206 aaPredicted RBP18.64■□□□□ 0.57
CCDC78-201ENST00000293889 FAM92AA1XBS5 289 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 TMEM191CA6NGB0 347 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 YJEFN3A6XGL0 299 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 E7ENQ6 273 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 ZRANB2O95218 330 aaKnown RBP eCLIP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 MOCS3O95396 460 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 RFC1P35251 1148 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 NAP1L1P55209 391 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 PLD1Q13393 1074 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 KCNC3Q14003 757 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 COL19A1Q14993 1142 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 VEPH1Q14D04 833 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 DCUN1D2Q6PH85 259 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 HFE2Q6ZVN8 426 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 RSRC2Q7L4I2 434 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 RNF10Q8N5U6 811 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 FEZF2Q8TBJ5 459 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 PPP2R3CQ969Q6 453 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 IRX2Q9BZI1 471 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 MAGED2Q9UNF1 606 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 GREB1Q4ZG55 1949 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 SPTBN5Q9NRC6 3674 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 SART1O43290 800 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 URI1O94763 535 aaPredicted RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 GLP2RO95838 553 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 LRG1P02750 347 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 CSH1P0DML2 217 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 CSH2P0DML3 217 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 HMGA1P17096 107 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 PGFP49763 221 aa18.63■□□□□ 0.57
CCDC78-201ENST00000293889 HADHBP55084 474 aaKnown RBP18.63■□□□□ 0.57
CCDC78-201ENST00000293889 GNG11P61952 73 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms