RNA–Protein interactions for RNA: ENST00000292538.8

CUX1-202, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 2,930 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-202ENST00000292538 HDAC4P56524 1084 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 CACNB2Q08289 660 aaPredicted RBP11.98□□□□□ -0.49
CUX1-202ENST00000292538 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 HIF1AQ16665 826 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 FNBP1LQ5T0N5 605 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 TAF2Q6P1X5 1199 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 ZCCHC9Q8N567 271 aaKnown RBP11.98□□□□□ -0.49
CUX1-202ENST00000292538 CMASQ8NFW8 434 aaPredicted RBP11.98□□□□□ -0.49
CUX1-202ENST00000292538 PYROXD1Q8WU10 500 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 SENP8Q96LD8 212 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 TBCBQ99426 244 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 RAB6BQ9NRW1 208 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 GTF2IRD1Q9UHL9 959 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 DERAQ9Y315 318 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 MFHAS1Q9Y4C4 1052 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 MGAMO43451 1857 aa11.98□□□□□ -0.49
CUX1-202ENST00000292538 TMEM120BA0PK00 339 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 ITGAVP06756 1048 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 RBL1P28749 1068 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CAP1Q01518 475 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 EFTUD2Q15029 972 aaKnown RBP eCLIP11.97□□□□□ -0.498e-8■■■■□ 20.9
CUX1-202ENST00000292538 STILQ15468 1287 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 ZKSCAN8Q15776 578 aaPredicted RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 MSS51Q4VC12 460 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 BSPRYQ5W0U4 402 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CENPUQ71F23 418 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PALM2Q8IXS6 379 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 DEFB106AQ8N104 65 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TTC39CQ8N584 583 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CCDC185Q8N715 623 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TTC13Q8NBP0 860 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 SLC35B2Q8TB61 432 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TLCD1Q96CP7 247 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 FAF2Q96CS3 445 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PGM2Q96G03 612 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TNIP3Q96KP6 325 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 KRT82Q9NSB4 513 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PIH1D1Q9NWS0 290 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 SEPT10Q9P0V9 454 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TRIP11Q15643 1979 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 ARL5CA6NH57 179 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 RASA4BC9J798 803 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 APOL1O14791 398 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 RASA4O43374 803 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 AGTP01019 485 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 APOC2P02655 101 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 BRAFP15056 766 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PTPN1P18031 435 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 SULT1E1P49888 294 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TAOK1Q7L7X3 1001 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CCDC110Q8TBZ0 833 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CCHCR1Q8TD31 782 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CPT1BQ92523 772 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.493e-7■■■■□ 19.9
CUX1-202ENST00000292538 RNF157Q96PX1 679 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 SLC4A5Q9BY07 1137 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TSPYL1Q9H0U9 437 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 KIF9Q9HAQ2 790 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 CHMP2BQ9UQN3 213 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 TRPV2Q9Y5S1 764 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 MYBPHLA2RUH7 354 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 F8W810 466 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 ZBED1O96006 694 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 APRTP07741 180 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PCK1P35558 622 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 ANKRD20A8PQ5CZ79 823 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 RNASEH2BQ5TBB1 312 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 C3orf62Q6ZUJ4 267 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 UNC93AQ86WB7 457 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 FUKQ8N0W3 1084 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 C4orf33Q8N1A6 199 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 NME8Q8N427 588 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PLD5Q8N7P1 536 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 C3orf58Q8NDZ4 430 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PCDH19Q8TAB3 1148 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 EDEM1Q92611 657 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 THOC1Q96FV9 657 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 XPO6Q96QU8 1125 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PCDH18Q9HCL0 1135 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 GGT7Q9UJ14 662 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 PADI3Q9ULW8 664 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 DRG1Q9Y295 367 aaKnown RBP11.97□□□□□ -0.49
CUX1-202ENST00000292538 FAM169AQ9Y6X4 670 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 SIP14410 1827 aa11.97□□□□□ -0.49
CUX1-202ENST00000292538 GOLGA8RI6L899 631 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 CA12O43570 354 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 AMPD1P23109 780 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 CYP2F1P24903 491 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 PNPLA4P41247 253 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 BRCC3P46736 316 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 LIG3P49916 1009 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 INHBEP58166 350 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 GBE1Q04446 702 aa11.96□□□□□ -0.49
CUX1-202ENST00000292538 PKDCCQ504Y2 493 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms