RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 LINC01599Q8WXQ3 324 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 TMEM109Q9BVC6 243 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 FOXP3Q9BZS1 431 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 ADAM7Q9H2U9 754 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 PCDH18Q9HCL0 1135 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 PTCH2Q9Y6C5 1203 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 NDC80O14777 642 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 SHOX2O60902 331 aaPredicted RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 SHBGP04278 402 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 PCSK1P29120 753 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MATKP42679 507 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 VEGFBP49765 207 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 NOMO1Q15155 1222 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 DPYSL2Q16555 572 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 OTUD1Q5VV17 481 aaPredicted RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 KDM7AQ6ZMT4 941 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MAP7D3Q8IWC1 876 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 ZCCHC9Q8N567 271 aaKnown RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MYCBPAPQ8TBZ2 947 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 PCED1BQ96HM7 432 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 RNF157Q96PX1 679 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 ZNF670Q9BS34 389 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 TMEM121Q9BTD3 319 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MED10Q9BTT4 135 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 CDC42EP4Q9H3Q1 356 aaKnown RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 LRRC4CQ9HCJ2 640 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 STARD7Q9NQZ5 370 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 GPATCH2LQ9NWQ4 482 aa10.63□□□□□ -0.71
C9orf43-201ENST00000288462 SAE1Q9UBE0 346 aaPredicted RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 TIMM13Q9Y5L4 95 aaPredicted RBP10.63□□□□□ -0.71
C9orf43-201ENST00000288462 MYBPHLA2RUH7 354 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 ZSCAN5DPP0CG00 497 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 IL4RP24394 825 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 GRK4P32298 578 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 LMAN1P49257 510 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 MRPS5P82675 430 aaKnown RBP10.62□□□□□ -0.71
C9orf43-201ENST00000288462 KRT81Q14533 505 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SLC29A2Q14542 456 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 CA9Q16790 459 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 ZC3H12AQ5D1E8 599 aaKnown RBP10.62□□□□□ -0.71
C9orf43-201ENST00000288462 KCTD16Q68DU8 428 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SLC9A4Q6AI14 798 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SCYL2Q6P3W7 929 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 RTN4RL1Q86UN2 441 aaPredicted RBP10.62□□□□□ -0.71
C9orf43-201ENST00000288462 HOOK3Q86VS8 718 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 CCDC25Q86WR0 208 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 ZMIZ2Q8NF64 920 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 ZNF296Q8WUU4 475 aaPredicted RBP10.62□□□□□ -0.71
C9orf43-201ENST00000288462 NT5C3BQ969T7 300 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SLC2A13Q96QE2 648 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 PKMYT1Q99640 499 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SMOQ99835 787 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SHOC2Q9UQ13 582 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 INPP5FQ9Y2H2 1132 aa10.62□□□□□ -0.71
C9orf43-201ENST00000288462 SGK1O00141 431 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ARVCFO00192 962 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 MCF2LO15068 1137 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 AP1G2O75843 785 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 B3GAT3O94766 335 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 FBXO21O94952 628 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 EOMESO95936 686 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ETS1P14921 441 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 NR1D1P20393 614 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 TGM2P21980 687 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 GDF10P55107 478 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 MAP3K7CLP57077 242 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 EIF3EP60228 445 aaKnown RBP10.61□□□□□ -0.71
C9orf43-201ENST00000288462 FAM189BP81408 668 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 IFFO1Q0D2I5 559 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 GPS1Q13098 491 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 MORF4L2Q15014 288 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ARHGEF6Q15052 776 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SLC25A52Q3SY17 297 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 RAB41Q5JT25 222 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 RNASEH2BQ5TBB1 312 aaKnown RBP10.61□□□□□ -0.71
C9orf43-201ENST00000288462 FAM171BQ6P995 826 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 CEP128Q6ZU80 1094 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SIX6OS1Q8N1H7 587 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 PQLC3Q8N755 202 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 RSPH1Q8WYR4 309 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SMARCD1Q96GM5 515 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SUSD3Q96L08 255 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 ACBD6Q9BR61 282 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SEZ6LQ9BYH1 1024 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 LRRC4Q9HBW1 653 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 TMEM30AQ9NV96 361 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 DSEQ9UL01 958 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 TPX2Q9ULW0 747 aaKnown RBP10.61□□□□□ -0.71
C9orf43-201ENST00000288462 HHLA1C9JL84 531 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 I3L4J1 428 aa10.61□□□□□ -0.71
C9orf43-201ENST00000288462 TYMPP19971 482 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms