RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TRIM56Q9BRZ2 755 aaKnown RBP13.91□□□□□ -0.18
SCAF4-201ENST00000286835 USP18Q9UMW8 372 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CLUHO75153 1309 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 A0A0B4J269 797 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 LYPLA1O75608 230 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-201ENST00000286835 PGM3O95394 542 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 PROCP04070 461 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 GSTA2P09210 222 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 FGFR1P11362 822 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 MMP8P22894 467 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 KDELR1P24390 212 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 MIPP30301 263 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CRADDP78560 199 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 LPCAT4Q643R3 524 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 RAPH1Q70E73 1250 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 VCPIP1Q96JH7 1222 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CEP41Q9BYV8 373 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 ADM5C9JUS6 153 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CREB3O43889 395 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CYP1A1P04798 512 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-201ENST00000286835 ITGAVP06756 1048 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 C6orf222P0C671 652 aaPredicted RBP13.91□□□□□ -0.18
SCAF4-201ENST00000286835 CDKN2BP42772 138 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 OGDHQ02218 1023 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 PEX6Q13608 980 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 RNF217Q8TC41 542 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 DENND1AQ8TEH3 1009 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 LRGUKQ96M69 825 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 UBIAD1Q9Y5Z9 338 aa13.91□□□□□ -0.18
SCAF4-201ENST00000286835 TP73O15350 636 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 BACE1P56817 501 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 SGSM1Q2NKQ1 1148 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 C15orf59Q2T9L4 293 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 PHF13Q86YI8 300 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 MFN1Q8IWA4 741 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 ULK2Q8IYT8 1036 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DNAAF3Q8N9W5 541 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 MIPOL1Q8TD10 442 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 AGAP3Q96P47 875 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 FAM49AQ9H0Q0 323 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 ZNF212Q9UDV6 495 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DRG1Q9Y295 367 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 SMCHD1A6NHR9 2005 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 C19orf81C9J6K1 198 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 TYROBPO43914 113 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 TAP1Q03518 808 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DYNC1I2Q13409 638 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 CDCA2Q69YH5 1023 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 CWF19L1Q69YN2 538 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 E9PBE3 544 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 KLHL41O60662 606 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 WNT7BP56706 349 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 AP1B1Q10567 949 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 TRMT5Q32P41 509 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DEFB107AQ8IZN7 70 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 BANPQ8N9N5 519 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 RPF1Q9H9Y2 349 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 CLIC5Q9NZA1 410 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 DDX60LQ5H9U9 1706 aaKnown RBP13.9□□□□□ -0.18
SCAF4-201ENST00000286835 PTPRJQ12913 1337 aa13.9□□□□□ -0.18
SCAF4-201ENST00000286835 TOP3BO95985 862 aaKnown RBP13.9□□□□□ -0.19
SCAF4-201ENST00000286835 COPAP53621 1224 aa13.9□□□□□ -0.19
SCAF4-201ENST00000286835 CYTH1Q15438 398 aa13.9□□□□□ -0.19
SCAF4-201ENST00000286835 ADGRD1Q6QNK2 874 aa13.9□□□□□ -0.19
SCAF4-201ENST00000286835 TRIM50Q86XT4 487 aa13.9□□□□□ -0.19
SCAF4-201ENST00000286835 HIC2Q96JB3 615 aa13.9□□□□□ -0.19
SCAF4-201ENST00000286835 STX18Q9P2W9 335 aaKnown RBP13.9□□□□□ -0.19
SCAF4-201ENST00000286835 SCN7AQ01118 1682 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 APOL1O14791 398 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 UGT1A9O60656 530 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 GCAP28676 217 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 RBL1P28749 1068 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 IYDQ6PHW0 289 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 CES3Q6UWW8 571 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 MMP19Q99542 508 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 PHACTR1Q9C0D0 580 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 RSAD1Q9HA92 442 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 C17orf75Q9HAS0 396 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 UGT1A7Q9HAW7 530 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 UGT1A10Q9HAW8 530 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 UGT1A8Q9HAW9 530 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 SPC25Q9HBM1 224 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 XAB2Q9HCS7 855 aaKnown RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 TELO2Q9Y4R8 837 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 C4BPAP04003 597 aaKnown RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 FASTKD1Q53R41 847 aaKnown RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 EFHC1Q5JVL4 640 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 TDRPQ86YL5 185 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 ANKRD13AQ8IZ07 590 aa13.89□□□□□ -0.19
SCAF4-201ENST00000286835 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
SCAF4-201ENST00000286835 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms