RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CLDN10P78369 228 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 GAD2Q05329 585 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 MESP2Q0VG99 397 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 CRY1Q16526 586 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 SGSM1Q2NKQ1 1148 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 ANO4Q32M45 955 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 ZACNQ401N2 412 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 SPOPLQ6IQ16 392 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 RHBDF2Q6PJF5 856 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 TMEM92Q6UXU6 159 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 PAQR9Q6ZVX9 377 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 RASSF3Q86WH2 238 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 NAT16Q8N8M0 369 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 OTUB2Q96DC9 234 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 ZFRQ96KR1 1074 aaKnown RBP13.51□□□□□ -0.25
CD44-203ENST00000278386 SMOQ99835 787 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 MMRN2Q9H8L6 949 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 POLMQ9NP87 494 aaPredicted RBP13.51□□□□□ -0.25
CD44-203ENST00000278386 ZDHHC4Q9NPG8 344 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 DMAC2Q9NW81 257 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 USP25Q9UHP3 1055 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 RCOR1Q9UKL0 485 aa13.51□□□□□ -0.25
CD44-203ENST00000278386 LAMA1P25391 3075 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 BCLAF3A2AJT9 711 aaKnown RBP13.5□□□□□ -0.25
CD44-203ENST00000278386 SGK1O00141 431 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TNFRSF10BO14763 440 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TLR5O60602 858 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 HLA-DRAP01903 254 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 RPN1P04843 607 aaKnown RBP13.5□□□□□ -0.25
CD44-203ENST00000278386 FAM200BP0CF97 657 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 BCKDHBP21953 392 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 NR2F2P24468 414 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 GRIA2P42262 883 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 ASPAP45381 313 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TUBP50607 506 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 KRT85P78386 507 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
CD44-203ENST00000278386 EOGTQ5NDL2 527 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 SV2AQ7L0J3 742 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 BBS7Q8IWZ6 715 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 PGBD3Q8N328 593 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 IL17RCQ8NAC3 791 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TMC2Q8TDI7 906 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 WHAMMQ8TF30 809 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 HMGB4Q8WW32 186 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TAF4BQ92750 862 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 FBXO44Q9H4M3 255 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 TLR8Q9NR97 1041 aaKnown RBP13.5□□□□□ -0.25
CD44-203ENST00000278386 COMMD8Q9NX08 183 aa13.5□□□□□ -0.25
CD44-203ENST00000278386 PI4KAP42356 2102 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ACACBO00763 2458 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ADAMTS9Q9P2N4 1935 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 TCRBV21S2A2A0A5A6 115 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 BEST1O76090 585 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ASS1P00966 412 aaKnown RBP13.49□□□□□ -0.25
CD44-203ENST00000278386 MYL1P05976 194 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 PRR29P0C7W0 189 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 KRT13P13646 458 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 HNRNPLP14866 589 aaKnown RBP eCLIP13.49□□□□□ -0.25
CD44-203ENST00000278386 SYKP43405 635 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 VAMP7P51809 220 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 GOLGA8FQ08AF8 430 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 GOLGA8DPQ0D2H9 430 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 PREPLQ4J6C6 727 aaPredicted RBP13.49□□□□□ -0.25
CD44-203ENST00000278386 C10orf76Q5T2E6 689 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 EMC10Q5UCC4 262 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 SNX30Q5VWJ9 437 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ARMCX6Q7L4S7 300 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 UNC93AQ86WB7 457 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ZNF513Q8N8E2 541 aaPredicted RBP13.49□□□□□ -0.25
CD44-203ENST00000278386 C12orf29Q8N999 325 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 SPHK2Q9NRA0 654 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 IL37Q9NZH6 218 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 DEC1Q9P2X7 70 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 LSM7Q9UK45 103 aaKnown RBP13.49□□□□□ -0.25
CD44-203ENST00000278386 GTF3C3Q9Y5Q9 886 aa13.49□□□□□ -0.25
CD44-203ENST00000278386 MAP1BP46821 2468 aaKnown RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 LNP1A1A4G5 178 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 FAM92AA1XBS5 289 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 NEDD8-MDP1E9PL57 170 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 KHNYNO15037 678 aaKnown RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 CYP26A1O43174 497 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 HOXC11O43248 304 aaPredicted RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 MAP3K13O43283 966 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TULP3O75386 442 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 ZDHHC11BP0C7U3 371 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 CD58P19256 250 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 CMA1P23946 247 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 TNFRSF4P43489 277 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 KIR2DL1P43626 348 aaPredicted RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 GCLMP48507 274 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 N4BP2L1Q5TBK1 243 aaPredicted RBP13.48□□□□□ -0.25
CD44-203ENST00000278386 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 PSAPL1Q6NUJ1 521 aa13.48□□□□□ -0.25
CD44-203ENST00000278386 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms