RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TTC4O95801 387 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 GNRH1P01148 92 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 CKBP12277 381 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 SKIP12755 728 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 GRIK3Q13003 919 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 TFDP2Q14188 446 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 KRT81Q14533 505 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 RNASEH2BQ5TBB1 312 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ECHDC2Q86YB7 292 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 PQLC3Q8N755 202 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 FAF2Q96CS3 445 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 PGM2Q96G03 612 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 MAK16Q9BXY0 300 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 TRPV6Q9H1D0 765 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 DNAJC17Q9NVM6 304 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 CDH9Q9ULB4 789 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 MYBPHLA2RUH7 354 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 DCDC2CA8MYV0 355 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 INPPL1O15357 1258 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 INHAP05111 366 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 FAM200BP0CF97 657 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ACTN2P35609 894 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 MATKP42679 507 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ATP1A2P50993 1020 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ATXN1P54253 815 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 EIF3EP60228 445 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 MRPS5P82675 430 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 MORF4L2Q15014 288 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ANKRD20A8PQ5CZ79 823 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 NPNTQ6UXI9 565 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 UHMK1Q8TAS1 419 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 SPATA18Q8TC71 538 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 NDRG1Q92597 394 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 PCED1BQ96HM7 432 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 RTP3Q9BQQ7 232 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 ZNF670Q9BS34 389 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 KRT82Q9NSB4 513 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 CALCOCO1Q9P1Z2 691 aa17.35■□□□□ 0.37
CCDC40-201ENST00000269318 NOVA2Q9UNW9 492 aaKnown RBP17.35■□□□□ 0.37
CCDC40-201ENST00000269318 CEP350Q5VT06 3117 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 TSC2P49815 1807 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 ERICH4A6NGS2 130 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 MCF2LO15068 1137 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 DAB1O75553 588 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 IFNB1P01574 187 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 RBP3P10745 1247 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 IRAK1P51617 712 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 MBTPS1Q14703 1052 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 DPYSL2Q16555 572 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 ERMARDQ5T6L9 678 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 SLC9A4Q6AI14 798 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 STRADAQ7RTN6 431 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 BNIPLQ7Z465 357 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 CROCCP2Q86T23 111 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 FAM35AQ86V20 835 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 UNC45BQ8IWX7 931 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 PLD5Q8N7P1 536 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 PCDH19Q8TAB3 1148 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 SMOQ99835 787 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 MED10Q9BTT4 135 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 NINJ2Q9NZG7 142 aa17.34■□□□□ 0.37
CCDC40-201ENST00000269318 BCCIPQ9P287 314 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC40-201ENST00000269318 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
CCDC40-201ENST00000269318 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.37
CCDC40-201ENST00000269318 A0A1W2PQY0 241 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 B3GAT3O94766 335 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 ACSL3O95573 720 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 CYP11A1P05108 521 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 L1CAMP32004 1257 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 NDUFV1P49821 464 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 MAP3K7CLP57077 242 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 TUSC3Q13454 348 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 KYNUQ16719 465 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 SLC25A52Q3SY17 297 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 OTUD1Q5VV17 481 aaPredicted RBP17.33■□□□□ 0.37
CCDC40-201ENST00000269318 RTN4RL1Q86UN2 441 aaPredicted RBP17.33■□□□□ 0.37
CCDC40-201ENST00000269318 DEFB106AQ8N104 65 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 ZMIZ2Q8NF64 920 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 MYCBPAPQ8TBZ2 947 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 NT5C3BQ969T7 300 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 RGS18Q9NS28 235 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 TMEM30AQ9NV96 361 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 MTMR10Q9NXD2 777 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 SHOC2Q9UQ13 582 aa17.33■□□□□ 0.37
CCDC40-201ENST00000269318 A6NNZ2 444 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 I3L4J1 428 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 M0QZQ0 153 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 NDC80O14777 642 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 ODC1P11926 461 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 RPL22P35268 128 aaKnown RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 CDR1P51861 262 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 MAGOHP61326 146 aaKnown RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 YWHAZP63104 245 aaKnown RBP17.33■□□□□ 0.36
CCDC40-201ENST00000269318 TUBB8Q3ZCM7 444 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 TNFAIP8L3Q5GJ75 292 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 CEP128Q6ZU80 1094 aa17.33■□□□□ 0.36
CCDC40-201ENST00000269318 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms