RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 SMIM10L2AP0DMW4 78 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 SMIM10L2BP0DMW5 78 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 ARSHQ5FYA8 562 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 CENPKQ9BS16 269 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 CINPQ9BW66 212 aaPredicted RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 DNAJC18Q9H819 358 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 PSD3Q9NYI0 1048 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 EPHB6O15197 1021 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 EGFRP00533 1210 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 PRKCIP41743 596 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 SLC9A9Q8IVB4 645 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 MDM1Q8TC05 714 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 TMEM39AQ9NV64 488 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 PKP3Q9Y446 797 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 ANGPT2O15123 496 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 PEX10O60683 326 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 DNAJC3Q13217 504 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 WDR59Q6PJI9 974 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 TRPM8Q7Z2W7 1104 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 EPS8L3Q8TE67 593 aaKnown RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 NRBF2Q96F24 287 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 SENP8Q96LD8 212 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 FOPNLQ96NB1 174 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 APOL2Q9BQE5 337 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 MRPL46Q9H2W6 279 aaKnown RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 PCDHB5Q9Y5E4 795 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 GJB6O95452 261 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 BTG3Q14201 252 aaPredicted RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 MIIPQ5JXC2 388 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 TMCO4Q5TGY1 634 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 TIGD7Q6NT04 549 aaPredicted RBP15.95■□□□□ 0.14
TIMP3-201ENST00000266085 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 MTMR14Q8NCE2 650 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 ARMC2Q8NEN0 867 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 ASPSCR1Q9BZE9 553 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 CDY2AQ9Y6F7 541 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 CDY1Q9Y6F8 540 aa15.95■□□□□ 0.14
TIMP3-201ENST00000266085 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 CCNE2O96020 404 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 RALBP11234 206 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 GTF2H3Q13889 308 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ST13P4Q8IZP2 240 aaPredicted RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 BLOC1S5Q8TDH9 187 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 MANSC1Q9H8J5 431 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ENTPD7Q9NQZ7 604 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 MRGBPQ9NV56 204 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 VGLL3A8MV65 326 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 SYF2O95926 243 aaKnown RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 NFICP08651 508 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 CHRM3P20309 590 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 SCNN1GP51170 649 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ZBTB41Q5SVQ8 909 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 EEF1DP3Q658K8 133 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 NT5DC3Q86UY8 548 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ZDHHC17Q8IUH5 632 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 LRRC40Q9H9A6 602 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 TGFB1I1O43294 461 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 HMGCRP04035 888 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 VCPP55072 806 aaKnown RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ABCE1P61221 599 aaKnown RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 FAM83EQ2M2I3 478 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 SYTL3Q4VX76 610 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 ZRANB3Q5FWF4 1079 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 C6orf10Q5SRN2 563 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 PCDH9Q9HC56 1237 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 VPS9D1Q9Y2B5 631 aa15.94■□□□□ 0.14
TIMP3-201ENST00000266085 MTO1Q9Y2Z2 717 aaKnown RBP15.94■□□□□ 0.14
TIMP3-201ENST00000266085 BTBD19C9JJ37 291 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 FARP2O94887 1054 aaPredicted RBP15.93■□□□□ 0.14
TIMP3-201ENST00000266085 LYPLA2O95372 231 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 PYGMP11217 842 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 MRNIPQ6NTE8 343 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 RAB42Q8N4Z0 105 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 APBA2Q99767 749 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
TIMP3-201ENST00000266085 ENDOD1O94919 500 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 ASS1P00966 412 aaKnown RBP15.93■□□□□ 0.14
TIMP3-201ENST00000266085 CALCAP01258 141 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 HYIQ5T013 277 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 PRUNE1Q86TP1 453 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 PGBD3Q8N328 593 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 USP13Q92995 863 aaPredicted RBP15.93■□□□□ 0.14
TIMP3-201ENST00000266085 FAM111AQ96PZ2 611 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 PCDHA3Q9Y5H8 950 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 AKAP12Q02952 1782 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 E5RJQ4 531 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 NFKBIEO00221 500 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 NCAM2O15394 837 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 B4GALT5O43286 388 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 CYP2F1P24903 491 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 MLH1P40692 756 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 TNFSF9P41273 254 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 MTFR1Q15390 333 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 LRRC8EQ6NSJ5 796 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 RFX8Q6ZV50 586 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 ARID3BQ8IVW6 561 aaPredicted RBP15.93■□□□□ 0.14
TIMP3-201ENST00000266085 PARP9Q8IXQ6 854 aa15.93■□□□□ 0.14
TIMP3-201ENST00000266085 OR5B17Q8NGF7 314 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms