RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 LPAR1Q92633 364 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 MYOZ2Q9NPC6 264 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 CEP170BQ9Y4F5 1589 aaPredicted RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 H3BQF6 201 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 SNAPC2Q13487 334 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ZSWIM2Q8NEG5 633 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 PRMT7Q9NVM4 692 aaPredicted RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 SYBUQ9NX95 663 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ENTPD3O75355 529 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 MT-CO1P00395 513 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 PCNAP12004 261 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 CYP2B6P20813 491 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 TCF7P36402 384 aaPredicted RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ATP6AP1LQ52LC2 224 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 ACOT1Q86TX2 421 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 CATSPER2Q96P56 530 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 TMEM79Q9BSE2 394 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 IL25Q9H293 177 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 PTPRHQ9HD43 1115 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 OSGEPQ9NPF4 335 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 SDR42E2A6NKP2 422 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 TAF6P49848 677 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 SNRPFP62306 86 aaKnown RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 KCTD14Q9BQ13 255 aaPredicted RBP18.56■□□□□ 0.56
COL5A3-201ENST00000264828 KCNH4Q9UQ05 1017 aa18.56■□□□□ 0.56
COL5A3-201ENST00000264828 STIP1P31948 543 aaKnown RBP18.55■□□□□ 0.56
COL5A3-201ENST00000264828 SCUBE2Q9NQ36 999 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 MSH4O15457 936 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 CLPTM1O96005 669 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 GPC1P35052 558 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 RGS2P41220 211 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
COL5A3-201ENST00000264828 GGA3Q9NZ52 723 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 C19orf81C9J6K1 198 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 GSTM1P09488 218 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 ATP1A4Q13733 1029 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 ARMCX4Q5H9R4 360 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 MRNIPQ6NTE8 343 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 CBWD2Q8IUF1 395 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 ATP6V0D2Q8N8Y2 350 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 RPRD1AQ96P16 312 aaPredicted RBP18.55■□□□□ 0.56
COL5A3-201ENST00000264828 DEPDC7Q96QD5 511 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 FICDQ9BVA6 458 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 KIAA1210Q9ULL0 1709 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 VPS26AO75436 327 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 DPEP1P16444 411 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 NOTUMQ6P988 496 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 RDM1Q8NG50 284 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 ALDH1A3P47895 512 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 CSHL1Q14406 222 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 BOLA3Q53S33 107 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 TCHHL1Q5QJ38 904 aaPredicted RBP18.55■□□□□ 0.56
COL5A3-201ENST00000264828 B3GALNT2Q8NCR0 500 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 FAM172AQ8WUF8 416 aa18.55■□□□□ 0.56
COL5A3-201ENST00000264828 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FAR2Q96K12 515 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 MED24O75448 989 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 BAIAP3O94812 1187 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 GMPSP49915 693 aaPredicted RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 CENPTQ96BT3 561 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 AP1G2O75843 785 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 CYP11B1P15538 503 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 GLB1LQ6UWU2 654 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 TMCC3Q9ULS5 477 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 SPTLC1O15269 473 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 IL5RAQ01344 420 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 CRYMQ14894 314 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 NFIL3Q16649 462 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 TTLL9Q3SXZ7 439 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 CCDC149Q6ZUS6 474 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 SLC47A2Q86VL8 602 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 C3orf20Q8ND61 904 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 RIT2Q99578 217 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FAM25AB3EWG3 89 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FAM25CB3EWG5 89 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FAM25GB3EWG6 89 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FEN1P39748 380 aaKnown RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 PEX5P50542 639 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ZNF177Q13360 481 aaPredicted RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 CNPY4Q8N129 248 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ENGASEQ8NFI3 743 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 SLC20A1Q8WUM9 679 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 PPP1R10Q96QC0 940 aaKnown RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 FRMD8Q9BZ67 464 aaPredicted RBP18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ERAP1Q9NZ08 941 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ADGRA3Q8IWK6 1321 aa18.54■□□□□ 0.56
COL5A3-201ENST00000264828 ACO1P21399 889 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 IQGAP1P46940 1657 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 WDR93Q6P2C0 686 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 DEFB107AQ8IZN7 70 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 MAGED4Q96JG8 741 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 UBP1Q9NZI7 540 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 CTNNAL1Q9UBT7 734 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 CPB2Q96IY4 423 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 PARK7Q99497 189 aaKnown RBP18.53■□□□□ 0.56
COL5A3-201ENST00000264828 SIKE1Q9BRV8 207 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 VTA1Q9NP79 307 aa18.53■□□□□ 0.56
COL5A3-201ENST00000264828 KRCC1Q9NPI7 259 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms