RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TTKP33981 857 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 OR1G1P47890 313 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 PPP3CCP48454 512 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 MTMR1Q13613 665 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 MAPK6Q16659 721 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SGO1Q5FBB7 561 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 USP17L6PQ6QN14 398 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SGF29Q96ES7 293 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TINF2Q9BSI4 451 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SLC24A2Q9UI40 661 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 EIF3LQ9Y262 564 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 HIST1H2AGP0C0S8 130 aaPredicted RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 HIST1H2ADP20671 130 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 CCT8P50990 548 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 CYP51A1Q16850 503 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 HIST1H2AHQ96KK5 128 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 HIST1H2AJQ99878 128 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 H2AFJQ9BTM1 129 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 BDH2Q9BUT1 245 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SIK2Q9H0K1 926 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 THAP2Q9H0W7 228 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ABCB10Q9NRK6 738 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ALOX5P09917 674 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FAM153BP0C7A2 387 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FLT3P36888 993 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 CDK16Q00536 496 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ZNF235Q14590 738 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FAM83EQ2M2I3 478 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FAM153CQ494X1 144 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 IER5Q5VY09 327 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ATG16L2Q8NAA4 619 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 DCAF4Q8WV16 495 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 VPS33AQ96AX1 596 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 C9orf16Q9BUW7 83 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 CPVLQ9H3G5 476 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FEM1BQ9UK73 627 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TELO2Q9Y4R8 837 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 NPHP4O75161 1426 aaPredicted RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 OTUD3Q5T2D3 398 aaPredicted RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 MZT2BQ6NZ67 158 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FAM43BQ6ZT52 329 aaPredicted RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TTC39CQ8N584 583 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 APPL2Q8NEU8 664 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 FBXO25Q8TCJ0 367 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 UBE2OQ9C0C9 1292 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TDRD3Q9H7E2 651 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ZNF624Q9P2J8 865 aaPredicted RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 WDR35Q9P2L0 1181 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 DPP7Q9UHL4 492 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 DSEQ9UL01 958 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 RBMX2Q9Y388 322 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 PCDHB12Q9Y5F1 795 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 EFCAB10A6NFE3 127 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SLCO1B7G3V0H7 640 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 NDUFS3O75489 264 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 PGK2P07205 417 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 GPSM2P81274 684 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 EXOSC10Q01780 885 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 LGALS3BPQ08380 585 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SPP2Q13103 211 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ARHGEF7Q14155 803 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 PTPAQ15257 358 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TYW3Q6IPR3 259 aaKnown RBP11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 DHRSXQ8N5I4 330 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ATG4AQ8WYN0 398 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 SEPHS2Q99611 448 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 TMEM47Q9BQJ4 181 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 DMTF1Q9Y222 760 aa11.09□□□□□ -0.63
SLC6A4-201ENST00000261707 ABCB11O95342 1321 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 ALDH6A1Q02252 535 aaKnown RBP11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 EPS8Q12929 822 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 ZNF846Q147U1 533 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 VPS37AQ8NEZ2 397 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 TSEN34Q9BSV6 310 aaKnown RBP11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 UBXN6Q9BZV1 441 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 GALNT8Q9NY28 637 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 TMCO1Q9UM00 188 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 PTGES3LE9PB15 166 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 PDGFRAP16234 1089 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 POU1F1P28069 291 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 SLC1A6P48664 564 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 GALK1P51570 392 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 HSD17B4P51659 736 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 SLC5A9Q2M3M2 681 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 FAM98BQ52LJ0 330 aaKnown RBP11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 TMC3Q7Z5M5 1100 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 S100ZQ8WXG8 99 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 ZNF669Q96BR6 464 aaPredicted RBP11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 GDF3Q9NR23 364 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 CHORDC1Q9UHD1 332 aaPredicted RBP11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 AGRPO00253 132 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 ZNF682O95780 498 aa11.08□□□□□ -0.64
SLC6A4-201ENST00000261707 MLNP12872 115 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms