RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 LHX5Q9H2C1 402 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 UBE2TQ9NPD8 197 aaPredicted RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 EMCNQ9ULC0 261 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 NAALADL1Q9UQQ1 740 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SDK1Q7Z5N4 2213 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 RFC5P40937 340 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 RPL21P46778 160 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ZBTB17Q13105 803 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ALCAMQ13740 583 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SEMA3AQ14563 771 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF484Q5JVG2 852 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC27A1Q6PCB7 646 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 FBXL13Q8NEE6 735 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 UBA3Q8TBC4 463 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 SECISBP2LQ93073 1101 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CCDC43Q96MW1 224 aaKnown RBP5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 TRIB3Q96RU7 358 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 PRDM6Q9NQX0 595 aa5.98□□□□□ -1.45
TOPBP1-201ENST00000260810 CACNA1GO43497 2377 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 CASTOR2A6NHX0 329 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 GRM6O15303 877 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 CR2P20023 1033 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 VAV2P52735 878 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 SPATA4Q8NEY3 305 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 PGAP3Q96FM1 320 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 FCRL3Q96P31 734 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 MPHOSPH6Q99547 160 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ZCWPW1Q9H0M4 648 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 IL1RAPL1Q9NZN1 696 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 PRDM4Q9UKN5 801 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ZFYVE26Q68DK2 2539 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 CTAGE9A4FU28 777 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 KRT87PA6NCN2 255 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 BMP15O95972 392 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 OAS1P00973 400 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 FTLP02792 175 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 CTAGE8P0CG41 777 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 EFTUD2Q15029 972 aaKnown RBP eCLIP5.97□□□□□ -1.453e-6■□□□□ 11.1
TOPBP1-201ENST00000260810 POLNQ7Z5Q5 900 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 CTAGE4Q8IX94 777 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ARL8AQ96BM9 186 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ZBP1Q9H171 429 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ACBD3Q9H3P7 528 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 EBF2Q9HAK2 575 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ZNF225Q9UK10 706 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 NUDT5Q9UKK9 219 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ATRXP46100 2492 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 MDM4O15151 490 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 GLULP15104 373 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 MAGEA6P43360 314 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 NOMO1Q15155 1222 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 NOMO2Q5JPE7 1267 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ACOT1Q86TX2 421 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ADAM32Q8TC27 787 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 MSLNLQ96KJ4 702 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 PRIMPOLQ96LW4 560 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC52A3Q9NQ40 469 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 ZHX1Q9UKY1 873 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 R3HCC1Q9Y3T6 440 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 FUT4P22083 530 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 TAP1Q03518 808 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 MMS22LQ6ZRQ5 1243 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 RPUSD2Q8IZ73 545 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 SLC39A11Q8N1S5 342 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 PTPRN2Q92932 1015 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 GPR78Q96P69 363 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 PBX4Q9BYU1 374 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 C11orf16Q9NQ32 467 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 GALPQ9UBC7 116 aa5.97□□□□□ -1.45
TOPBP1-201ENST00000260810 AKR1B15C9JRZ8 316 aaPredicted RBP5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 MCF2P10911 925 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 ELF2Q15723 593 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 NAT8LQ8N9F0 302 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 ATP6V0A1Q93050 837 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 ADAM2Q99965 735 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 TDRD1Q9BXT4 1180 aaKnown RBP5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 FAM49AQ9H0Q0 323 aaPredicted RBP5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 CWC15Q9P013 229 aaKnown RBP5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 TSPAN16Q9UKR8 245 aa5.96□□□□□ -1.45
TOPBP1-201ENST00000260810 DOCK10Q96BY6 2186 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 GOLGA6L7A0A1B0GV03 622 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 LINC01553A4QN01 128 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 DLG1Q12959 904 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 AGERQ15109 404 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ZNF280DQ6N043 979 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 RFLNAQ6ZTI6 216 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 TRIM58Q8NG06 486 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ARHGEF4Q9NR80 690 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 CTNNAL1Q9UBT7 734 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 E7ESA3 106 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 WARSP23381 471 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 EPHA5P54756 1037 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 BCAR1P56945 870 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 C2orf54Q08AI8 447 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 PTPRNQ16849 979 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 EXOC3L4Q17RC7 722 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 KRT39Q6A163 491 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 NLRX1Q86UT6 975 aa5.96□□□□□ -1.46
TOPBP1-201ENST00000260810 SOCS4Q8WXH5 440 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms