RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SCD5Q86SK9 330 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 TMC8Q8IU68 726 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 HS6ST3Q8IZP7 471 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 IRGQQ8WZA9 623 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 NMUR1Q9HB89 426 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 IL21Q9HBE4 155 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 METTL5Q9NRN9 209 aaKnown RBP16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 EHD2Q9NZN4 543 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 CLEC1BQ9P126 229 aa16.59■□□□□ 0.25
CCDC90B-201ENST00000260054 ZNF638Q14966 1978 aaKnown RBP16.58■□□□□ 0.25
CCDC90B-201ENST00000260054 MYO16Q9Y6X6 1858 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 PJA2O43164 708 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 TADA3O75528 432 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 ABL1P00519 1130 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 POU2F2P09086 479 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 SCNN1AP37088 669 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 DLX2Q07687 328 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 SYCE2Q6PIF2 218 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 FAM149B1Q96BN6 582 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 SLITRK1Q96PX8 696 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 CORO1BQ9BR76 489 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 SELENOOQ9BVL4 669 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 PARVAQ9NVD7 372 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 OSER1Q9NX31 292 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 CLDND1Q9NY35 253 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 DNMT3BQ9UBC3 853 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 TMEM59LQ9UK28 342 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 DUSP10Q9Y6W6 482 aa16.58■□□□□ 0.24
CCDC90B-201ENST00000260054 A0A1W2PQH9 124 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 SART1O43290 800 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 XYLBO75191 536 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 TBX10O75333 385 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 LTFP02788 710 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 ZDHHC11BP0C7U3 371 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 SRGAP2BP0DMP2 458 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 KRT3P12035 628 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 YWHAGP61981 247 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 RPL7AP62424 266 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 EFHC1Q5JVL4 640 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 RARS2Q5T160 578 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 TRNP1Q6NT89 227 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 TMEM150AQ86TG1 271 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 MON1AQ86VX9 555 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 EMC1Q8N766 993 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 CMASQ8NFW8 434 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 JOSD2Q8TAC2 188 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 NUP85Q9BW27 656 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 APOL5Q9BWW9 433 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 OSGEPQ9NPF4 335 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 ASNSD1Q9NWL6 643 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 MTMR10Q9NXD2 777 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 SALL4Q9UJQ4 1053 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 COG5Q9UP83 839 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 SCINQ9Y6U3 715 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 DOCK6Q96HP0 2047 aa16.57■□□□□ 0.24
CCDC90B-201ENST00000260054 SIGLEC16A6NMB1 481 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 F11P03951 625 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 FYNP06241 537 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 PTPN2P17706 415 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 RFC1P35251 1148 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 FLT3P36888 993 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 LTBRP36941 435 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 ARHGAP25P42331 645 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 RNASE9P60153 205 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 BSPRYQ5W0U4 402 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 GAREM2Q75VX8 874 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 GRASPQ7Z6J2 395 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 RFFLQ8WZ73 363 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 SMG7Q92540 1137 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 MCEEQ96PE7 176 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 TRIM7Q9C029 511 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 MRPL47Q9HD33 250 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 ASAH2Q9NR71 780 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 NCK2O43639 380 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 HSF2BPO75031 334 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 RHOP08100 348 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 GLI1P08151 1106 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 FOSL2P15408 326 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 GABRR2P28476 465 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 CCR2P41597 374 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 EPHA5P54756 1037 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 YWHAZP63104 245 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 NTHL1P78549 312 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 EP400NLQ6ZTU2 488 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 PDZD8Q8NEN9 1154 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 OVCA2Q8WZ82 227 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 EDEM1Q92611 657 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 PABPC5Q96DU9 382 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 POPDC2Q9HBU9 364 aa16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 TLR8Q9NR97 1041 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-201ENST00000260054 UVRAGQ9P2Y5 699 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms