RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PPP1R10Q96QC0 940 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 PAIP2Q9BPZ3 127 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 ZNF446Q9NWS9 450 aa12.17□□□□□ -0.46
LIN28A-201ENST00000254231 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
LIN28A-201ENST00000254231 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PCSK1P29120 753 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 BCAT1P54687 386 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PLPP4Q5VZY2 271 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 IL31Q6EBC2 164 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CIR1Q86X95 450 aaPredicted RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 SH2D3CQ8N5H7 860 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CCDC185Q8N715 623 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PPANQ9NQ55 473 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 GIT1Q9Y2X7 761 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CELSR3Q9NYQ7 3312 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 TTC24A2A3L6 582 aaPredicted RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 TMEM191CA6NGB0 347 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 DDX3YO15523 660 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 SASH3O75995 380 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 ANXA13P27216 316 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 ETFBP38117 255 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 POU5F1BQ06416 359 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 TTC27Q6P3X3 843 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CLEC20AQ6ZU45 233 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CD302Q8IX05 232 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 IFT20Q8IY31 132 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 FBXO25Q8TCJ0 367 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CYP2S1Q96SQ9 504 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 SPON2Q9BUD6 331 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CYP3A43Q9HB55 503 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 ASNSD1Q9NWL6 643 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 RIF1Q5UIP0 2472 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 VGLL3A8MV65 326 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 DFFAO00273 331 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 USP12O75317 370 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CYP1A2P05177 515 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PNPLA4P41247 253 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 YWHAZP63104 245 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 ZNF252P-AS1Q0IIN9 211 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 KYAT1Q16773 422 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 TRIM72Q6ZMU5 477 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CFAP52Q8N1V2 620 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PRELID2Q8N945 189 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 MGARPQ8TDB4 240 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PDCD6IPQ8WUM4 868 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 PBKQ96KB5 322 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 MPP6Q9NZW5 540 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 XPO7Q9UIA9 1087 aaKnown RBP12.16□□□□□ -0.46
LIN28A-201ENST00000254231 STRIP2Q9ULQ0 834 aa12.16□□□□□ -0.46
LIN28A-201ENST00000254231 CLTBP09497 229 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 GOT1P17174 413 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 EPHB2P29323 1055 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 ARSEP51690 589 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 CASP8Q14790 479 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
LIN28A-201ENST00000254231 TRNP1Q6NT89 227 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 ANKRD52Q8NB46 1076 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 TRIM11Q96F44 468 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 SMOQ99835 787 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 ADAM28Q9UKQ2 775 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 MAD1L1Q9Y6D9 718 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
LIN28A-201ENST00000254231 E7EVH7 732 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 CTIFO43310 598 aaKnown RBP12.15□□□□□ -0.46
LIN28A-201ENST00000254231 TRAPPC3O43617 180 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 TUBB4AP04350 444 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 RBP3P10745 1247 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 BBS9Q3SYG4 887 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 CEP85LQ5SZL2 805 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 KRT222Q8N1A0 295 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 C3orf20Q8ND61 904 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 OLIG1Q8TAK6 271 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 ATXN7L3BQ96GX2 97 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 HES6Q96HZ4 224 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 LBHD1Q9BQE6 289 aaPredicted RBP12.15□□□□□ -0.46
LIN28A-201ENST00000254231 SYT11Q9BT88 431 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 C11orf49Q9H6J7 331 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 RASAL2Q9UJF2 1139 aa12.15□□□□□ -0.46
LIN28A-201ENST00000254231 LAMA1P25391 3075 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 POC1B-GALNT4F8VUJ3 575 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 KCNN4O15554 427 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ECEL1O95672 775 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 SLC6A3Q01959 620 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 C1QBPQ07021 282 aaKnown RBP12.14□□□□□ -0.47
LIN28A-201ENST00000254231 CFAP58Q5T655 872 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 ZNF677Q86XU0 584 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 JAMLQ86YT9 394 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 LRRC52Q8N7C0 313 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 P3H4Q92791 437 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 FAM136AQ96C01 138 aa12.14□□□□□ -0.47
LIN28A-201ENST00000254231 TRIM43BA6NCK2 446 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms