RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 FAM200BP0CF97 657 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 RBP3P10745 1247 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 ETS1P14921 441 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 MMRN1Q13201 1228 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 UPP1Q16831 310 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 RAB6CQ53S08 254 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 MDH1BQ5I0G3 518 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 RNASEH2BQ5TBB1 312 aaKnown RBP24.27■■□□□ 1.48
MSX2-201ENST00000239243 MFSD5Q6N075 450 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 SYT15Q9BQS2 421 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 RAB6CQ9H0N0 254 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 LRRC4Q9HBW1 653 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 NINJ2Q9NZG7 142 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 PECAM1P16284 738 aaPredicted RBP24.27■■□□□ 1.48
MSX2-201ENST00000239243 MATKP42679 507 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 ADIGQ0VDE8 80 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 TTC25Q96NG3 672 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 CWC15Q9P013 229 aaKnown RBP24.27■■□□□ 1.48
MSX2-201ENST00000239243 CDH9Q9ULB4 789 aa24.27■■□□□ 1.48
MSX2-201ENST00000239243 MOXD2PA6NHM9 499 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 APOL1O14791 398 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 MGEA5O60502 916 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 AFF1P51825 1210 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 ROR1Q01973 937 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 GRIK3Q13003 919 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 KYNUQ16719 465 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 SKIDA1Q1XH10 827 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 TRIM71Q2Q1W2 868 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 UHMK1Q8TAS1 419 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 GLT1D1Q96MS3 346 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 SERPINB12Q96P63 405 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 PHACTR1Q9C0D0 580 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 SRRM3A6NNA2 597 aaPredicted RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 DAB1O75553 588 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 GNRH1P01148 92 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 ODC1P11926 461 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 PCSK1P29120 753 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 DPYSL2Q16555 572 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 ANKRD20A8PQ5CZ79 823 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 ZC3H12AQ5D1E8 599 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 CLEC20AQ6ZU45 233 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 PAQR9Q6ZVX9 377 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 SIX6OS1Q8N1H7 587 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 RAET1EQ8TD07 263 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 EPS8L3Q8TE67 593 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 PXYLP1Q8TE99 480 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 ADAM2Q99965 735 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 CCDC77Q9BR77 488 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 TRMT13Q9NUP7 481 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 DNAJC17Q9NVM6 304 aaKnown RBP24.26■■□□□ 1.47
MSX2-201ENST00000239243 SLC12A6Q9UHW9 1150 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 PTCH2Q9Y6C5 1203 aa24.26■■□□□ 1.47
MSX2-201ENST00000239243 CASTOR2A6NHX0 329 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 TCEA3O75764 348 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 ATP5DP30049 168 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 MAGEA4P43358 317 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 MRPS5P82675 430 aaKnown RBP24.25■■□□□ 1.47
MSX2-201ENST00000239243 UBAP2Q5T6F2 1119 aaKnown RBP24.25■■□□□ 1.47
MSX2-201ENST00000239243 SLC9A4Q6AI14 798 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 PPIL6Q8IXY8 311 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 RNF169Q8NCN4 708 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 FAF2Q96CS3 445 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 UROC1Q96N76 676 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 LRRC4CQ9HCJ2 640 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 CLDN5O00501 218 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 TOMM70O94826 608 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 FBXO21O94952 628 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 ABHD2P08910 425 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 IL4RP24394 825 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 SLC25A52Q3SY17 297 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 CENPUQ71F23 418 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 C3orf58Q8NDZ4 430 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 CD99L2Q8TCZ2 262 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 FAM149B1Q96BN6 582 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 CRTAC1Q9NQ79 661 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 KRT82Q9NSB4 513 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 CACNG4Q9UBN1 327 aa24.25■■□□□ 1.47
MSX2-201ENST00000239243 FARP1Q9Y4F1 1045 aaPredicted RBP24.25■■□□□ 1.47
MSX2-201ENST00000239243 CFAP69A5D8W1 941 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 SMIM23A6NLE4 172 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 ZFXP17010 805 aaPredicted RBP24.24■■□□□ 1.47
MSX2-201ENST00000239243 CTCFP49711 727 aaPredicted RBP24.24■■□□□ 1.47
MSX2-201ENST00000239243 GDF10P55107 478 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 BCAR1P56945 870 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 YWHAZP63104 245 aaKnown RBP24.24■■□□□ 1.47
MSX2-201ENST00000239243 GUCY1A3Q02108 690 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 DARS2Q6PI48 645 aaKnown RBP24.24■■□□□ 1.47
MSX2-201ENST00000239243 METTL23Q86XA0 190 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 TSEN34Q9BSV6 310 aaKnown RBP24.24■■□□□ 1.47
MSX2-201ENST00000239243 GPATCH2LQ9NWQ4 482 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 STAP1Q9ULZ2 295 aa24.24■■□□□ 1.47
MSX2-201ENST00000239243 ARHGEF37A1IGU5 675 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 LSP1P33241 339 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 ADCY1Q08828 1119 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 AUHQ13825 339 aaKnown RBP24.23■■□□□ 1.47
MSX2-201ENST00000239243 STAT4Q14765 748 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 TTC19Q6DKK2 380 aaPredicted RBP24.23■■□□□ 1.47
MSX2-201ENST00000239243 TAOK1Q7L7X3 1001 aa24.23■■□□□ 1.47
MSX2-201ENST00000239243 PSTKQ8IV42 348 aaKnown RBP24.23■■□□□ 1.47
MSX2-201ENST00000239243 PLD5Q8N7P1 536 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms