RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 BTN3A3O00478 584 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PSMA2P25787 234 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 ALDH16A1Q8IZ83 802 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 MCUQ8NE86 351 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PROX1Q92786 737 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TTYH3Q9C0H2 523 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 TPK1Q9H3S4 243 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 DNAJC18Q9H819 358 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 SALL4Q9UJQ4 1053 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 PADI4Q9UM07 663 aa13.3□□□□□ -0.28
VAMP4-201ENST00000236192 LRRIQ4A6NIV6 560 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 C6orf229H3BNL8 230 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 COX4I1P13073 169 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 FGFR3P22607 806 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 FOXN2P32314 431 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 RECQLP46063 649 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 PPP2R2DQ66LE6 453 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ZSCAN18Q8TBC5 510 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ARMC7Q9H6L4 198 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 BARHL2Q9NY43 387 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 PPM1HQ9ULR3 514 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SHOC2Q9UQ13 582 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 COPG1Q9Y678 874 aaKnown RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 UGGT1Q9NYU2 1555 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SHPRHQ149N8 1683 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ABCA6Q8N139 1617 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 PRR5-ARHGAP8B1AHC4 643 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 FOXN3O00409 490 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 TRAFD1O14545 582 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 TNPO2O14787 897 aaKnown RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 GCLMP48507 274 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ARHGAP8P85298 464 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ALCAMQ13740 583 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SF3B3Q15393 1217 aaKnown RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 MROH9Q5TGP6 573 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 NCLNQ969V3 563 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ARHGEF26Q96DR7 871 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 NSMCE4AQ9NXX6 385 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SAGE2PA6NJ88 616 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 K7EPI3 171 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SNAP91O60641 907 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 DHFR2Q86XF0 187 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 UBASH3BQ8TF42 649 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 COL3A1P02461 1466 aaPredicted RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 TRPC5OSA6NMA1 111 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 NBNO60934 754 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 CALB1P05937 261 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 ADSSP30520 456 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 SFT2D3Q587I9 215 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 KYAT3Q6YP21 454 aaKnown RBP13.29□□□□□ -0.28
VAMP4-201ENST00000236192 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 PCDHA3Q9Y5H8 950 aa13.29□□□□□ -0.28
VAMP4-201ENST00000236192 TNFRSF21O75509 655 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 GSTM4Q03013 218 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 TFDP1Q14186 410 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 CARTPTQ16568 116 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 MYLK3Q32MK0 819 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PRR23BQ6ZRT6 265 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
VAMP4-201ENST00000236192 FAM172BPA6NC97 362 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 TLR2O60603 784 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 VAMP7P51809 220 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PDK1Q15118 436 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 C6orf10Q5SRN2 563 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 IRF2BP1Q8IU81 584 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 CGREF1Q99674 301 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 TCF7L2Q9NQB0 619 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 A0A1W2PRG6 482 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 DCXO43602 365 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 SERPINE1P05121 402 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PHKA2P46019 1235 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 NT5C2P49902 561 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 EIF3EP60228 445 aaKnown RBP13.28□□□□□ -0.28
VAMP4-201ENST00000236192 CERKLQ49MI3 558 aaPredicted RBP13.28□□□□□ -0.28
VAMP4-201ENST00000236192 TRIM72Q6ZMU5 477 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 MKL1Q969V6 931 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 BORCS6Q96GS4 357 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PIGSQ96S52 555 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 EYA3Q99504 573 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 FANCEQ9HB96 536 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 DDX43Q9NXZ2 648 aaKnown RBP13.28□□□□□ -0.28
VAMP4-201ENST00000236192 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 FAM47E-STBD1D6RA91 191 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PSMB9P28065 219 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 PRKG1Q13976 671 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 ZBTB41Q5SVQ8 909 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
VAMP4-201ENST00000236192 SVOPQ8N4V2 548 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms