RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 BANPQ8N9N5 519 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 SLC35B2Q8TB61 432 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 PAIP2Q9BPZ3 127 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 MAK16Q9BXY0 300 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.43■■□□□ 1.02
SNX3-201ENST00000230085 DDX56Q9NY93 547 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 PCDH10Q9P2E7 1040 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 STX18Q9P2W9 335 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 KCNG1Q9UIX4 513 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 DNPEPQ9ULA0 475 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 CBX6O95503 412 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 CLTBP09497 229 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 SKIP12755 728 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 CLCN3P51790 818 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 TAP1Q03518 808 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 PTK7Q13308 1070 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 PLEKHG4Q58EX7 1191 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 EP400NLQ6ZTU2 488 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 GALNT15Q8N3T1 639 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 DNAJB3Q8WWF6 145 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 CPA5Q8WXQ8 436 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 SLC7A3Q8WY07 619 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 DPF3Q92784 378 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 FAM167BQ9BTA0 163 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 NMRK1Q9NWW6 199 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 ZNF212Q9UDV6 495 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 DNAJB4Q9UDY4 337 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 STYXL1Q9Y6J8 313 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 IGKV6-21A0A0C4DH24 114 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 TCRBV5S1A1TA0A578 114 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 FAM170AA1A519 330 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 KLHL33A6NCF5 533 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 TMEM191CA6NGB0 347 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 F8W8V4 182 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 GSC2O15499 205 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 DGAT1O75907 488 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 TMEM191BP0C7N4 346 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 RAP1GDS1P52306 607 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 RBBP5Q15291 538 aaKnown RBP21.42■■□□□ 1.02
SNX3-201ENST00000230085 OR52E8Q6IFG1 317 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 MAEAQ7L5Y9 396 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 NSL1Q96IY1 281 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 TRIM55Q9BYV6 548 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 PDLIM7Q9NR12 457 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 TOPORSQ9NS56 1045 aaPredicted RBP21.42■■□□□ 1.02
SNX3-201ENST00000230085 TMEM39AQ9NV64 488 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 PPME1Q9Y570 386 aa21.42■■□□□ 1.02
SNX3-201ENST00000230085 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.42■■□□□ 1.02
SNX3-201ENST00000230085 CLUHO75153 1309 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 DENND3A2RUS2 1198 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 POC1B-GALNT4F8VUJ3 575 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 ENTPD5O75356 428 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 HAUS5O94927 633 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 SP100P23497 879 aaPredicted RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 RFC5P40937 340 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 GPX6P59796 221 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 SLC34A1Q06495 639 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 GPS1Q13098 491 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 EMC2Q15006 297 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 MAPK6Q16659 721 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 WDR44Q5JSH3 913 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TAF2Q6P1X5 1199 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 POLNQ7Z5Q5 900 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 C7orf61Q8IZ16 206 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 KIAA0319LQ8IZA0 1049 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 C4orf33Q8N1A6 199 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TTC8Q8TAM2 541 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TSC22D3Q99576 134 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 SYNCQ9H7C4 482 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 XPNPEP1Q9NQW7 623 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 PRDM5Q9NQX1 630 aaPredicted RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 DDX43Q9NXZ2 648 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 hCG_1818297A0A087WSY0 165 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 SMIM35A0A1B0GVV1 85 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 LSM8O95777 96 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 C4BPAP04003 597 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 KRT4P19013 534 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 MMP8P22894 467 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TBXAS1P24557 533 aaPredicted RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 SARNPP82979 210 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 CDK16Q00536 496 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 FASTKD3Q14CZ7 662 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 TAZQ16635 292 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 HIF1AQ16665 826 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 WDR72Q3MJ13 1102 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 CWF19L1Q69YN2 538 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 ZNF449Q6P9G9 518 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 SPOCD1Q6ZMY3 1216 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 MTDHQ86UE4 582 aaKnown RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 LINC01465Q8N7H1 131 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TMEM143Q96AN5 459 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
SNX3-201ENST00000230085 SYT15Q9BQS2 421 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 VPS37BQ9H9H4 285 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 KMT5AQ9NQR1 393 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TBX21Q9UL17 535 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 ZNF148Q9UQR1 794 aa21.41■■□□□ 1.02
SNX3-201ENST00000230085 TNRC18O15417 2968 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms