RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SLC18A1P54219 525 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CTC1Q2NKJ3 1217 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 GRAMD1BQ3KR37 738 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PTPN20Q4JDL3 420 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SATL1Q86VE3 508 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 NAT8LQ8N9F0 302 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 FAM71DQ8N9W8 422 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC24A2Q9UI40 661 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SPATA31C2B4DYI2 1134 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PSMG1O95456 288 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 LMNAP02545 664 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CALB1P05937 261 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 VAV1P15498 845 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PSMA2P25787 234 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 NAMPTP43490 491 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 ADARP55265 1226 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CNTN2Q02246 1040 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC25A11Q02978 314 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 RAB6CQ53S08 254 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 LRRC38Q5VT99 294 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLFN12LQ6IEE8 588 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CLNKQ7Z7G1 428 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 TMEM35BQ8NCS4 154 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SMC1BQ8NDV3 1235 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 RAB3IL1Q8TBN0 382 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CLPTM1LQ96KA5 538 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 IMPG2Q9BZV3 1241 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 IQCGQ9H095 443 aaKnown RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 RAB6CQ9H0N0 254 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 GINM1Q9NU53 330 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SENP1Q9P0U3 644 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 POLIQ9UNA4 740 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAFBQ9Y5Q3 323 aaPredicted RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 H0YCG3 227 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 AVILO75366 819 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 CIB2O75838 187 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ATP5HO75947 161 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ITGA2BP08514 1039 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 CDH8P55286 799 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PIGHQ14442 188 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 GRAMD4Q6IC98 578 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ADGRD1Q6QNK2 874 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 SAMD7Q7Z3H4 446 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PALM2Q8IXS6 379 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 KBTBD2Q8IY47 623 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 LRRN4Q8WUT4 740 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 DCAKDQ8WVC6 231 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC7A3Q8WY07 619 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 FBXO6Q9NRD1 293 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 NDE1Q9NXR1 346 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 H3BRJ5 948 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 C2CD2LO14523 706 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 FAM189A1O60320 539 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 LDHAP00338 332 aaKnown RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PIGRP01833 764 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 TROVE2P10155 538 aaKnown RBP eCLIP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 CD19P15391 556 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PTPN4P29074 926 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 EPHB1P54762 984 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 BACE1P56817 501 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 BASP1P80723 227 aaKnown RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 TFAMQ00059 246 aaKnown RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 C1orf146Q5VVC0 180 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 XRRA1Q6P2D8 792 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 OLFML1Q6UWY5 402 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 NPNTQ6UXI9 565 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PPIL6Q8IXY8 311 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 BANPQ8N9N5 519 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 AGBL3Q8NEM8 1001 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 GSDMBQ8TAX9 411 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 INPP5DQ92835 1189 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 SERAC1Q96JX3 654 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ANKRD27Q96NW4 1050 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 THTPAQ9BU02 230 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAF1Q9H063 256 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ASCC2Q9H1I8 757 aaPredicted RBP9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARL8BQ9NVJ2 186 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 HEY2Q9UBP5 337 aa9.78□□□□□ -0.84
HLA-DOA-201ENST00000229829 PIK3R2O00459 728 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 FAM155BO75949 473 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 ENO1P06733 434 aaKnown RBP9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 SRGAP2CP0DJJ0 459 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 KRT3P12035 628 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 AMPD1P23109 780 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 SERPINB6P35237 376 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 MMRN1Q13201 1228 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 WASHC2DQ5SRD0 308 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 NIM1KQ8IY84 436 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 RTKN2Q8IZC4 609 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 NME8Q8N427 588 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 SH3TC2Q8TF17 1288 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 RSAD2Q8WXG1 361 aa9.77□□□□□ -0.84
HLA-DOA-201ENST00000229829 LENG1Q96BZ8 264 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms