RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 SOWAHAQ2M3V2 549 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 EFHC1Q5JVL4 640 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SCARA3Q6AZY7 606 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 NPAS4Q8IUM7 802 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 ZDHHC14Q8IZN3 488 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SMG8Q8ND04 991 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 ATXN2LQ8WWM7 1075 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 KCTD13Q8WZ19 329 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 ELMO3Q96BJ8 720 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 MRPL38Q96DV4 380 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 UROC1Q96N76 676 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 MCEEQ96PE7 176 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 PPP1R10Q96QC0 940 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 CPXM1Q96SM3 734 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 PABPC3Q9H361 631 aaKnown RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SNX25Q9H3E2 840 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 EPHX3Q9H6B9 360 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 SMYD3Q9H7B4 428 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 UBE2ZQ9H832 354 aaPredicted RBP11.17□□□□□ -0.62
CDCA3-201ENST00000229265 TSPAN16Q9UKR8 245 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 NCOR1O75376 2440 aa11.17□□□□□ -0.62
CDCA3-201ENST00000229265 A0A0U1RQF3 1178 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TBKBP1A7MCY6 615 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 F8VP50 259 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 H3BQF6 201 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 M0QYV0 167 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 INPPL1O15357 1258 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 EFCAB14O75071 495 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 RNF40O75150 1001 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 EOMESO95936 686 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FAM153BP0C7A2 387 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 RALAP11233 206 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 GPD1P21695 349 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 KCNA5P22460 613 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 KDELR1P24390 212 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 PTPN9P43378 593 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 MARCKSL1P49006 195 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 BCAT1P54687 386 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TAS2R40P59535 323 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 LILRA4P59901 499 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 BST2Q10589 180 aaKnown RBP11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TFDP2Q14188 446 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 BTG3Q14201 252 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-201ENST00000229265 PPP1R7Q15435 360 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FAM153CQ494X1 144 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 C6orf118Q5T5N4 469 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 AGBL2Q5U5Z8 902 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TWF2Q6IBS0 349 aaKnown RBP11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TTC27Q6P3X3 843 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 SCARA5Q6ZMJ2 495 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 SPOCD1Q6ZMY3 1216 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 BBS12Q6ZW61 710 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 TMC3Q7Z5M5 1100 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 ECHDC2Q86YB7 292 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FIBCD1Q8N539 461 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 OR6B3Q8NGW1 331 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FAM76AQ8TAV0 307 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 PIK3R5Q8WYR1 880 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 SNF8Q96H20 258 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 ZIM3Q96PE6 472 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 SLITRK1Q96PX8 696 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 STMN4Q9H169 189 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FAM105AQ9NUU6 356 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 CLEC1BQ9P126 229 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 CACNG4Q9UBN1 327 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 CHORDC1Q9UHD1 332 aaPredicted RBP11.16□□□□□ -0.62
CDCA3-201ENST00000229265 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
CDCA3-201ENST00000229265 hCG_1818297A0A087WSY0 165 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 GOLGA6CA6NDK9 693 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 C2CD4BA6NLJ0 364 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 NT5C1B-RDH14C9J2C7 533 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 PER2O15055 1255 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 LRCH4O75427 683 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 TRUB2O95900 331 aaKnown RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 MYZAPP0CAP1 466 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 GOLGA6DP0CG33 693 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 ZFXP17010 805 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 IVDP26440 423 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 HSD17B3P37058 310 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CDKN2BP42772 138 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CDR1P51861 262 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 PMS2P54278 862 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 AIF1P55008 147 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 PLTPP55058 493 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 SKOR1P84550 965 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 DHX9Q08211 1270 aaKnown RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 PPP1R26Q5T8A7 1209 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 SLC26A9Q7LBE3 791 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 SCML4Q8N228 414 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 TSEN2Q8NCE0 465 aaKnown RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 CENPIQ92674 756 aaPredicted RBP11.15□□□□□ -0.62
CDCA3-201ENST00000229265 FAM84AQ96KN4 292 aa11.15□□□□□ -0.62
CDCA3-201ENST00000229265 TWNKQ96RR1 684 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms