RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 LRG1P02750 347 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 FYNP06241 537 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 HNRNPA1P09651 372 aaKnown RBP eCLIP14.73□□□□□ -0.05
SEC61B-201ENST00000223641 RFC1P35251 1148 aaPredicted RBP14.73□□□□□ -0.05
SEC61B-201ENST00000223641 RPL7AP62424 266 aaKnown RBP14.73□□□□□ -0.05
SEC61B-201ENST00000223641 YWHAZP63104 245 aaKnown RBP14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ADGRE1Q14246 886 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 VEPH1Q14D04 833 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 TAF5Q15542 800 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 TCEAL5Q5H9L2 206 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 PPM1LQ5SGD2 360 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF697Q5TEC3 545 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 SNX30Q5VWJ9 437 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 SCD5Q86SK9 330 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ITIH5Q86UX2 942 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 MON1AQ86VX9 555 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ZSCAN30Q86W11 494 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF276Q8N554 614 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 EFHBQ8N7U6 833 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 JOSD2Q8TAC2 188 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF564Q8TBZ8 553 aaPredicted RBP14.73□□□□□ -0.05
SEC61B-201ENST00000223641 FNIP1Q8TF40 1166 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 SELENOOQ9BVL4 669 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 REV3LO60673 3130 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 OBSL1O75147 1896 aa14.73□□□□□ -0.05
SEC61B-201ENST00000223641 ANAPC1Q9H1A4 1944 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 GOLGA8SH3BPF8 625 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 HSF2BPO75031 334 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 GJB6O95452 261 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 GLP2RO95838 553 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 LTFP02788 710 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 GTF2F1P35269 517 aaKnown RBP eCLIP14.72□□□□□ -0.05
SEC61B-201ENST00000223641 FLT3P36888 993 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 PGFP49763 221 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 PSEN1P49768 467 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 EPHA5P54756 1037 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 TAF10Q12962 218 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 COL19A1Q14993 1142 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 ARHGAP29Q52LW3 1261 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 TRNP1Q6NT89 227 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 ELMSAN1Q6PJG2 1045 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 HFE2Q6ZVN8 426 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 TMC8Q8IU68 726 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 CMASQ8NFW8 434 aaPredicted RBP14.72□□□□□ -0.05
SEC61B-201ENST00000223641 TPCN2Q8NHX9 752 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 NT5C3BQ969T7 300 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 TRIM7Q9C029 511 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 NMUR1Q9HB89 426 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 POPDC2Q9HBU9 364 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 LZTFL1Q9NQ48 299 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
SEC61B-201ENST00000223641 CTTNBP2NLQ9P2B4 639 aa14.72□□□□□ -0.05
SEC61B-201ENST00000223641 NOTCH4Q99466 2003 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 RFPL2O75678 378 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 F11P03951 625 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 PPP3CCP48454 512 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 RBM10P98175 930 aaKnown RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 OGDHQ02218 1023 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF252P-AS1Q0IIN9 211 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ADAM15Q13444 863 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 CTC1Q2NKJ3 1217 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 BSPRYQ5W0U4 402 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 BNIPLQ7Z465 357 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 TMEM150AQ86TG1 271 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ARHGAP18Q8N392 663 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 C17orf53Q8N3J3 647 aaPredicted RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 PDZD8Q8NEN9 1154 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 CASP10Q92851 521 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF707Q96C28 371 aaPredicted RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ZNF512Q96ME7 567 aaPredicted RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 MCEEQ96PE7 176 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 SLITRK1Q96PX8 696 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 DDX23Q9BUQ8 820 aaKnown RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 TRIM62Q9BVG3 475 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 PRKD2Q9BZL6 878 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 IL21Q9HBE4 155 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 ABCC13Q9NSE7 274 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 DZANK1Q9NVP4 752 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 OSER1Q9NX31 292 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 CLIC5Q9NZA1 410 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 UXTQ9UBK9 157 aaPredicted RBP14.71□□□□□ -0.05
SEC61B-201ENST00000223641 LCMT1Q9UIC8 334 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 GUCA1BQ9UMX6 200 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 SZT2Q5T011 3432 aa14.71□□□□□ -0.05
SEC61B-201ENST00000223641 PRRC2BQ5JSZ5 2229 aaKnown RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 DPYSL4O14531 572 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 BUB1O43683 1085 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 TADA3O75528 432 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 DAB1O75553 588 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 GRAP2O75791 330 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 NOS2P35228 1153 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 MATKP42679 507 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 PTPN9P43378 593 aa14.7□□□□□ -0.06
SEC61B-201ENST00000223641 NOP2P46087 812 aaKnown RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 ZNF143P52747 638 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 YWHAGP61981 247 aaKnown RBP eCLIP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 IFRD2Q12894 506 aaPredicted RBP14.7□□□□□ -0.06
SEC61B-201ENST00000223641 ACAP1Q15027 740 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms