RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 SERPINB4P48594 390 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 ZNF200P98182 395 aaPredicted RBP16.58■□□□□ 0.24
SF3A2-201ENST00000221494 SP4Q02446 784 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 FAM110CQ1W6H9 321 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 ZNF792Q3KQV3 632 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 FOXB2Q5VYV0 432 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 PLA2G4FQ68DD2 849 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 LLGL2Q6P1M3 1020 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 RHPN2Q8IUC4 686 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 SDR16C5Q8N3Y7 309 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 ECSITQ9BQ95 431 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 MIS12Q9H081 205 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 STN1Q9H668 368 aaKnown RBP16.58■□□□□ 0.24
SF3A2-201ENST00000221494 PIDD1Q9HB75 910 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 NDUFA13Q9P0J0 144 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 ARHGAP28Q9P2N2 729 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 COMMD3-BMI1R4GMX3 469 aa16.58■□□□□ 0.24
SF3A2-201ENST00000221494 EIF4E1BA6NMX2 242 aaKnown RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 SPECC1L-ADORA2AF8WAN1 911 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 PI4K2BG5E9Z4 385 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 LDHAP00338 332 aaKnown RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 PIGRP01833 764 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 INHBAP08476 426 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ADORA2AP29274 412 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 CDK7P50613 346 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 AP3M2P53677 418 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ZNF252P-AS1Q0IIN9 211 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 PTK7Q13308 1070 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FNBP1LQ5T0N5 605 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ZFYVE27Q5T4F4 411 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ANO5Q75V66 913 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 CCDC60Q8IWA6 550 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 UBR7Q8N806 425 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FNIP1Q8TF40 1166 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 TMEM121Q9BTD3 319 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FBXO6Q9NRD1 293 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 RPS6KL1Q9Y6S9 549 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 B2RBV5 119 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 MAP3K13O43283 966 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FARP2O94887 1054 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 SUPT20HL2P0C7V6 817 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 CCNFP41002 786 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 PLCB3Q01970 1234 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 C1QTNF12Q5T7M4 302 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 LGSNQ5TDP6 509 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 TTC39BQ5VTQ0 682 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 SLFN12LQ6IEE8 588 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 TMEM270Q6UE05 265 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 CAPN12Q6ZSI9 719 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ST13P4Q8IZP2 240 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 TMEM35BQ8NCS4 154 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 RSAD2Q8WXG1 361 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 FAM161BQ96MY7 647 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 HAPLN3Q96S86 360 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 SH2D3AQ9BRG2 576 aa16.57■□□□□ 0.24
SF3A2-201ENST00000221494 GPBP1L1Q9HC44 474 aaPredicted RBP16.57■□□□□ 0.24
SF3A2-201ENST00000221494 C3orf70A6NLC5 250 aaPredicted RBP16.56■□□□□ 0.24
SF3A2-201ENST00000221494 DGAT1O75907 488 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 ARIH2O95376 493 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 IFNB1P01574 187 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 SLC10A3P09131 477 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 POLE2P56282 527 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 EFTUD2Q15029 972 aaKnown RBP eCLIP16.56■□□□□ 0.241e-9■■■■■ 30.5
SF3A2-201ENST00000221494 LY6KQ17RY6 165 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 ARHGAP22Q7Z5H3 698 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 GPR142Q7Z601 462 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 PPP1R12CQ9BZL4 782 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 IQCGQ9H095 443 aaKnown RBP16.56■□□□□ 0.24
SF3A2-201ENST00000221494 EPB41L1Q9H4G0 881 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 ADGRA2Q96PE1 1338 aa16.56■□□□□ 0.24
SF3A2-201ENST00000221494 IGKV6D-21A0A0A0MT36 114 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 ASB14A6NK59 587 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 BIRC5O15392 142 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 VNN1O95497 513 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 TNNI1P19237 187 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 BGNP21810 368 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 RPL22P35268 128 aaKnown RBP16.55■□□□□ 0.24
SF3A2-201ENST00000221494 RPL7AP62424 266 aaKnown RBP16.55■□□□□ 0.24
SF3A2-201ENST00000221494 IRX4P78413 519 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 LAMB3Q13751 1172 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 HADHQ16836 314 aaKnown RBP16.55■□□□□ 0.24
SF3A2-201ENST00000221494 MSS51Q4VC12 460 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 ATP13A4Q4VNC1 1196 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 HP1BP3Q5SSJ5 553 aaPredicted RBP16.55■□□□□ 0.24
SF3A2-201ENST00000221494 DCUN1D2Q6PH85 259 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 TRMT1LQ7Z2T5 733 aaKnown RBP16.55■□□□□ 0.24
SF3A2-201ENST00000221494 SLC26A11Q86WA9 606 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 KBTBD2Q8IY47 623 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 ZNF606Q8WXB4 792 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 JADE3Q92613 823 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 MTBPQ96DY7 904 aa16.55■□□□□ 0.24
SF3A2-201ENST00000221494 FAM111AQ96PZ2 611 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms