RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 HTTP42858 3142 aa18■□□□□ 0.47
RABGGTA-201ENST00000216840 A0A1W2PQ45 241 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 A0A1W2PQY0 241 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 MYBPHLA2RUH7 354 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 FAM200BP0CF97 657 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 CAPN2P17655 700 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 GPS1Q13098 491 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 CA9Q16790 459 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 KRT82Q9NSB4 513 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 CDH9Q9ULB4 789 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 INPP5FQ9Y2H2 1132 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 I3L4J1 428 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 NR1D1P20393 614 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 MAP2K2P36507 400 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 ATXN1P54253 815 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 MRPS5P82675 430 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 TUSC3Q13454 348 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 TFDP2Q14188 446 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 MBTPS1Q14703 1052 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 RTN4RL1Q86UN2 441 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 FAM35AQ86V20 835 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 PCED1BQ96HM7 432 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 PKNOX2Q96KN3 472 aa17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 HMX1Q9NP08 348 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 DNAJC17Q9NVM6 304 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 TPX2Q9ULW0 747 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-201ENST00000216840 SHOX2O60902 331 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 B3GAT3O94766 335 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 IFNB1P01574 187 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 ODC1P11926 461 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 MATKP42679 507 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 NDUFV1P49821 464 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 GDF10P55107 478 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 MAP3K7CLP57077 242 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 EIF3EP60228 445 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 PAN2Q504Q3 1202 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 ANKRD20A8PQ5CZ79 823 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 NPNTQ6UXI9 565 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 HOOK3Q86VS8 718 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 VSIG1Q86XK7 387 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 DEFB106AQ8N104 65 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 ZCCHC9Q8N567 271 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 SLAIN1Q8ND83 568 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 UHMK1Q8TAS1 419 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 MYCBPAPQ8TBZ2 947 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 SMOQ99835 787 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 RTP3Q9BQQ7 232 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 TMEM109Q9BVC6 243 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 FOXP3Q9BZS1 431 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 LRRC4Q9HBW1 653 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 RGS18Q9NS28 235 aa17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 BCCIPQ9P287 314 aaKnown RBP eCLIP17.98■□□□□ 0.47
RABGGTA-201ENST00000216840 MCF2LO15068 1137 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 INPPL1O15357 1258 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 DAB1O75553 588 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 BRCC3P46736 316 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 NOMO1Q15155 1222 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 SPATA18Q8TC71 538 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 STARD7Q9NQZ5 370 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 CALCOCO1Q9P1Z2 691 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 AP1G2O75843 785 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 CYP11A1P05108 521 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 PCSK1P29120 753 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 VEGFBP49765 207 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 ATP1A2P50993 1020 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 RABGGTBP53611 331 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 RNASEH2BQ5TBB1 312 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 STRADAQ7RTN6 431 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 RELL1Q8IUW5 271 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 UNC45BQ8IWX7 931 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 PCDH19Q8TAB3 1148 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 RSAD2Q8WXG1 361 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 FAF2Q96CS3 445 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 UROC1Q96N76 676 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 CAPS2Q9BXY5 557 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 NOVA2Q9UNW9 492 aaKnown RBP17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 PTCH2Q9Y6C5 1203 aa17.97■□□□□ 0.47
RABGGTA-201ENST00000216840 ZNF487B1APH4 448 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 C9IYK1 514 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 M0QZQ0 153 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 ACSL3O95573 720 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 TTC4O95801 387 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 RBP3P10745 1247 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 L1CAMP32004 1257 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 TKTL1P51854 596 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 YWHAZP63104 245 aaKnown RBP17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 MORF4L2Q15014 288 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 DPYSL2Q16555 572 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 SLC25A52Q3SY17 297 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 SLC9A4Q6AI14 798 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 SIX6OS1Q8N1H7 587 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 PLD5Q8N7P1 536 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 ZMIZ2Q8NF64 920 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 LINC01599Q8WXQ3 324 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 P3H4Q92791 437 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 FAM149B1Q96BN6 582 aa17.96■□□□□ 0.47
RABGGTA-201ENST00000216840 TLCD1Q96CP7 247 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms