RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 EURLQ9NYK6 297 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 LGALS13Q9UHV8 139 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 CDY2AQ9Y6F7 541 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PIAS1O75925 651 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 KIAA0754O94854 1291 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 RARBP10826 455 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ANKRD20A8PQ5CZ79 823 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 FAM47CQ5HY64 1035 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ZDHHC17Q8IUH5 632 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 NME8Q8N427 588 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PLD5Q8N7P1 536 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 B3GALNT2Q8NCR0 500 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 NDRG1Q92597 394 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 WNT8BQ93098 351 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SEC16BQ96JE7 1060 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SCN10AQ9Y5Y9 1956 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 C5orf60A6NFR6 353 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 RASA4BC9J798 803 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 CLDN5O00501 218 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ALOX15BO15296 676 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 RASA4O43374 803 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 DESP17661 470 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MLH1P40692 756 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 AFF1P51825 1210 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ARL4CP56559 192 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SNX16P57768 344 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MRPS6P82932 125 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MPP2Q14168 576 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PDK2Q15119 407 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 GKAP1Q5VSY0 366 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 TAF2Q6P1X5 1199 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MICALCLQ6ZW33 695 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC26A9Q7LBE3 791 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 LRRC34Q8IZ02 419 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PQLC3Q8N755 202 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PCDH19Q8TAB3 1148 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 GDAP1Q8TB36 358 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 WDR83Q9BRX9 315 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ARHGAP39Q9C0H5 1083 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 XPO7Q9UIA9 1087 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 CLUHO75153 1309 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 M0QZ92 97 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 NDC80O14777 642 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 APOL1O14791 398 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 DUSP11O75319 330 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 IGHA2P01877 340 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 VIMP08670 466 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 IBSPP21815 317 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SSTR1P30872 391 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 BCAR1P56945 870 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 GPX6P59796 221 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ADIGQ0VDE8 80 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 GDF6Q6KF10 455 aaPredicted RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 SPATS2Q86XZ4 545 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC33Q8N5R6 958 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PYROXD1Q8WU10 500 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 TEKT4Q8WW24 435 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 TNIP3Q96KP6 325 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 DHX35Q9H5Z1 703 aaKnown RBP8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ZNF638Q14966 1978 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CYB561D2O14569 222 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 MDM4O15151 490 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 KCNN4O15554 427 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 RDXP35241 583 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 LIG3P49916 1009 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 EFTUD2Q15029 972 aaKnown RBP eCLIP8.31□□□□□ -1.087e-13■■■■■ 47.1
HMGXB4-201ENST00000216106 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 RNF187Q5TA31 235 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 WSCD1Q658N2 575 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 PIGZQ86VD9 579 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CACNA2D3Q8IZS8 1091 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 FUKQ8N0W3 1084 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 FBXO36Q8NEA4 188 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 LPPQ93052 612 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 FAM149B1Q96BN6 582 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CABS1Q96KC9 395 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 PPP1R10Q96QC0 940 aaKnown RBP8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 TBCBQ99426 244 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 KIF9Q9HAQ2 790 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 UBN1Q9NPG3 1134 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 ST3GAL5Q9UNP4 418 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 BEST1O76090 585 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 SLC10A3P09131 477 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 RBL1P28749 1068 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 PTPN9P43378 593 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 LIMS2Q7Z4I7 341 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 OTUD6BQ8N6M0 293 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC185Q8N715 623 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 TRIB2Q92519 343 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 ZIC5Q96T25 663 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 GAD1Q99259 594 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 ZNF670Q9BS34 389 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 C11orf84Q9BUA3 381 aaPredicted RBP8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC134Q9H6E4 229 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 FAM105AQ9NUU6 356 aa8.31□□□□□ -1.08
HMGXB4-201ENST00000216106 CYP2F1P24903 491 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms