RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 TMCO3Q6UWJ1 677 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 PASD1Q8IV76 773 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 SLC4A11Q8NBS3 891 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 MAIP1Q8WWC4 291 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 SMG7Q92540 1137 aaKnown RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 ZMAT2Q96NC0 199 aaKnown RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 FAM193BQ96PV7 902 aaPredicted RBP12.87□□□□□ -0.35
SNU13-201ENST00000215956 TMEM175Q9BSA9 504 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 HERC2P3Q9BVR0 1158 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 TUBGCP4Q9UGJ1 667 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 IP6K2Q9UHH9 426 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 SNX9Q9Y5X1 595 aa12.87□□□□□ -0.35
SNU13-201ENST00000215956 TMEM110-MUSTN1A8MSY1 372 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 TEX28O15482 410 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 HUS1O60921 280 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 RFPL2O75678 378 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 ALDH2P05091 517 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 THP07101 528 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 H2AFXP16104 143 aaPredicted RBP12.86□□□□□ -0.35
SNU13-201ENST00000215956 DESP17661 470 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 COMTP21964 271 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 CXCR5P32302 372 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 CETN2P41208 172 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 RAP1GAPP47736 663 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 DNA2P51530 1060 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 NDST1P52848 882 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 GLRA4Q5JXX5 417 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 DNAJC24Q6P3W2 148 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 AGMOQ6ZNB7 445 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 TOP6BLQ8N6T0 577 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 C1orf131Q8NDD1 294 aaKnown RBP12.86□□□□□ -0.35
SNU13-201ENST00000215956 PJA1Q8NG27 643 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 TSC1Q92574 1164 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 TNIP3Q96KP6 325 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 RUNDC3BQ96NL0 473 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 PSMB7Q99436 277 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 ZSWIM1Q9BR11 485 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 SDCBP2Q9H190 292 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 SNX25Q9H3E2 840 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 SYNCQ9H7C4 482 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 RSAD1Q9HA92 442 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 HESX1Q9UBX0 185 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 RAB21Q9UL25 225 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 PACSIN2Q9UNF0 486 aaPredicted RBP12.86□□□□□ -0.35
SNU13-201ENST00000215956 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.86□□□□□ -0.35
SNU13-201ENST00000215956 SSX2IPQ9Y2D8 614 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 CFAP47Q6ZTR5 3102 aa12.86□□□□□ -0.35
SNU13-201ENST00000215956 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 NRP1O14786 923 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 DDX3YO15523 660 aaKnown RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 ATP8B1O43520 1251 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 PROSCO94903 275 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 GLULP15104 373 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 AFF1P51825 1210 aaKnown RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 GUCY2FP51841 1108 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 CDH8P55286 799 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 RWDD2BP57060 319 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 ZNF268Q14587 947 aaPredicted RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 NAA30Q147X3 362 aaPredicted RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 WDR93Q6P2C0 686 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 LCLAT1Q6UWP7 414 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 GET4Q7L5D6 327 aaPredicted RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 C3orf20Q8ND61 904 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 APPL2Q8NEU8 664 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 WHAMMQ8TF30 809 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 PPP1R10Q96QC0 940 aaKnown RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 PARD6BQ9BYG5 372 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 FOXQ1Q9C009 403 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 SLC2A4RGQ9NR83 387 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 MARCH5Q9NX47 278 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 KANSL3Q9P2N6 904 aa12.85□□□□□ -0.35
SNU13-201ENST00000215956 PRG3Q9Y2Y8 225 aaPredicted RBP12.85□□□□□ -0.35
SNU13-201ENST00000215956 M0QYV0 167 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 O00370 1275 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 MICAL2O94851 1124 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 POMCP01189 267 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 LAMP2P13473 410 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 GLUD2P49448 558 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 C2orf54Q08AI8 447 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 PTP4A2Q12974 167 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 MAMLD1Q13495 774 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 HTR4Q13639 388 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 PIGHQ14442 188 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 C8orf74Q6P047 294 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 DCUN1D2Q6PH85 259 aa12.84□□□□□ -0.35
SNU13-201ENST00000215956 MAML2Q8IZL2 1156 aaPredicted RBP12.84□□□□□ -0.35
SNU13-201ENST00000215956 OR6B3Q8NGW1 331 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms