RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 NPNTQ6UXI9 565 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 CYP4V2Q6ZWL3 525 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ANKMY2Q8IV38 441 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 CDKL3Q8IVW4 592 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 LRRC34Q8IZ02 419 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 CRYBG2Q8N1P7 616 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TOP6BLQ8N6T0 577 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SLC2A14Q8TDB8 520 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SGSM3Q96HU1 749 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 HSFY1Q96LI6 401 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SMC6Q96SB8 1091 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 GOLGA2P5Q9HBQ8 144 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 PCDH18Q9HCL0 1135 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 RNF19AQ9NV58 838 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 NME7Q9Y5B8 376 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TRIP12Q14669 1992 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TRPM7Q96QT4 1865 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 FAM47DPA6NHR8 397 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 KCNN4O15554 427 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TSHRP16473 764 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ZFXP17010 805 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 GBP2P32456 591 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 HDAC4P56524 1084 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 IRX5P78411 483 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 PURAQ00577 322 aaKnown RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 IL9RQ01113 521 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 HIC1Q14526 733 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ITIH4Q14624 930 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 BBS9Q3SYG4 887 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ANKRD20A8PQ5CZ79 823 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ZC3H12AQ5D1E8 599 aaKnown RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 EFHC1Q5JVL4 640 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 UBXN11Q5T124 520 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ANKRD22Q5VYY1 191 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 C6orf89Q6UWU4 347 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ARCQ7LC44 396 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 PALM2Q8IXS6 379 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TAB3Q8N5C8 712 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 B3GALNT2Q8NCR0 500 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 FAF2Q96CS3 445 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 B3GNT5Q9BYG0 378 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 FRMD8Q9BZ67 464 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 KLC2Q9H0B6 622 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 ACTR5Q9H9F9 607 aaPredicted RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SPC25Q9HBM1 224 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SLC38A7Q9NVC3 462 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 EURLQ9NYK6 297 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 FETUBQ9UGM5 382 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 SMG5Q9UPR3 1016 aaKnown RBP8.61□□□□□ -1.03
VAMP3-201ENST00000054666 HEY1Q9Y5J3 304 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 TRPV2Q9Y5S1 764 aa8.61□□□□□ -1.03
VAMP3-201ENST00000054666 E7ESA3 106 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 XPO1O14980 1071 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 SPTLC1O15269 473 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 CHADO15335 359 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 HCRTO43612 131 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 TMEM63AO94886 807 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FGFR1P11362 822 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 CREB1P16220 341 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 WARSP23381 471 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 CYP2F1P24903 491 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 GEMIN4P57678 1058 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 MRPS6P82932 125 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 RASA2Q15283 850 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 DPYSL2Q16555 572 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 CST9Q5W186 159 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 SLC9A4Q6AI14 798 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 C17orf99Q6UX52 265 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 TRABD2AQ86V40 505 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FAM228AQ86W67 206 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 CYP4X1Q8N118 509 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 PLD5Q8N7P1 536 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FBXO36Q8NEA4 188 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 GDAP1Q8TB36 358 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FAM149B1Q96BN6 582 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 MTG1Q9BT17 334 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 RNF39Q9H2S5 420 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 DHX35Q9H5Z1 703 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 AP4E1Q9UPM8 1137 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 DUSP11O75319 330 aaKnown RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 BANF1O75531 89 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 SPAG6O75602 509 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 TOMM70O94826 608 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 LMO2P25791 158 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 LRPAP1P30533 357 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 HOXC8P31273 242 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 ARL4AP40617 200 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 LILRA4P59901 499 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 SOX4Q06945 474 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 ADCY1Q08828 1119 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 TTC31Q49AM3 519 aaPredicted RBP8.6□□□□□ -1.03
VAMP3-201ENST00000054666 RAB6CQ53S08 254 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 EFHC2Q5JST6 749 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 FNBP1LQ5T0N5 605 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 C4orf22Q6V702 233 aa8.6□□□□□ -1.03
VAMP3-201ENST00000054666 STRADAQ7RTN6 431 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms