RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 SPATA32Q96LK8 384 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 CCSER2Q9H7U1 834 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 PNPLA8Q9NP80 782 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 CYLDQ9NQC7 956 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 RXFP3Q9NSD7 469 aa16.81■□□□□ 0.28
ERCC1-201ENST00000013807 ASCC3Q8N3C0 2202 aaKnown RBP16.81■□□□□ 0.28
ERCC1-201ENST00000013807 A0A1W2PQ27 194 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 A0A1W2PQ64 194 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 A0A1W2PQD8 194 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 ANTXRLA6NF34 631 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 HOXC11O43248 304 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-201ENST00000013807 GREM1O60565 184 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 APODP05090 189 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 ADH5P11766 374 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 SYKP43405 635 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 VAMP7P51809 220 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 GAD2Q05329 585 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 MESP2Q0VG99 397 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 PPM1JQ5JR12 505 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 LY6G5CQ5SRR4 150 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 PMS2CLQ68D20 193 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 KLHDC10Q6PID8 442 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 HTR3DQ70Z44 454 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 INTS8Q75QN2 995 aaKnown RBP16.8■□□□□ 0.28
ERCC1-201ENST00000013807 C12orf40Q86WS4 652 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 GUF1Q8N442 669 aaKnown RBP16.8■□□□□ 0.28
ERCC1-201ENST00000013807 C12orf50Q8NA57 414 aaPredicted RBP16.8■□□□□ 0.28
ERCC1-201ENST00000013807 SLC2A14Q8TDB8 520 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 MED10Q9BTT4 135 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
ERCC1-201ENST00000013807 KRT82Q9NSB4 513 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 SCML2Q9UQR0 700 aa16.8■□□□□ 0.28
ERCC1-201ENST00000013807 HHLA1C9JL84 531 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 PGFP49763 221 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 NDUFA8P51970 172 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 IFRD2Q12894 506 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 PREPLQ4J6C6 727 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 AASDHQ4L235 1098 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 TMEM92Q6UXU6 159 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 SCARA5Q6ZMJ2 495 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 C12orf29Q8N999 325 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 MDGA1Q8NFP4 955 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 ELMO3Q96BJ8 720 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 FAM124BQ9H5Z6 455 aaPredicted RBP16.79■□□□□ 0.28
ERCC1-201ENST00000013807 GMIPQ9P107 970 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 HMGXB4Q9UGU5 601 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 STARD13Q9Y3M8 1113 aa16.79■□□□□ 0.28
ERCC1-201ENST00000013807 CEP295Q9C0D2 2601 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 DCLK1O15075 740 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 TLR5O60602 858 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 FAM200BP0CF97 657 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 CCDC130P13994 396 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 HNRNPLP14866 589 aaKnown RBP eCLIP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 TRIM21P19474 475 aaKnown RBP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 NR2F2P24468 414 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SEC13P55735 322 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 ZCWPW2Q504Y3 356 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SPDYCQ5MJ68 293 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 STPG1Q5TH74 334 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 IL31Q6EBC2 164 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SPOPLQ6IQ16 392 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 KRBA2Q6ZNG9 492 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 CLEC20AQ6ZU45 233 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SFTPA1Q8IWL2 248 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 LSM14BQ9BX40 385 aaKnown RBP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 APOBEC3GQ9HC16 384 aaKnown RBP16.78■□□□□ 0.28
ERCC1-201ENST00000013807 ARHGEF4Q9NR80 690 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SPHK2Q9NRA0 654 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 ATP6V1DQ9Y5K8 247 aa16.78■□□□□ 0.28
ERCC1-201ENST00000013807 SGK1O00141 431 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 ADAM23O75077 832 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CILPO75339 1184 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 TULP3O75386 442 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 ALDH1A2O94788 518 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CAVIN2O95810 425 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 PRR29P0C7W0 189 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 GTF2H1P32780 548 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
ERCC1-201ENST00000013807 ATP5C1P36542 298 aaKnown RBP16.77■□□□□ 0.28
ERCC1-201ENST00000013807 MAP3K7CLP57077 242 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CCDC6Q16204 474 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 EDRF1Q3B7T1 1238 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 EOGTQ5NDL2 527 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 BBS7Q8IWZ6 715 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 CCDC33Q8N5R6 958 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 ALLCQ8N6M5 410 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 TXNDC5Q8NBS9 432 aaKnown RBP16.77■□□□□ 0.28
ERCC1-201ENST00000013807 SPRYD3Q8NCJ5 442 aa16.77■□□□□ 0.28
ERCC1-201ENST00000013807 TAS1R2Q8TE23 839 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms