RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Epn3Q91W69 636 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kdelr1Q99JH8 212 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Emc2Q9CRD2 297 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Bcl9lQ67FY2 1494 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Smok3cA0A087WSF2 504 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Vmn2r39L7N2E5 861 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 AmacrO09174 381 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Xbp1O35426 267 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pi4kbQ8BKC8 816 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ssh3Q8K330 649 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Atp6v1g1Q9CR51 118 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Castor1Q9CWQ8 331 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Katnal2Q9D3R6 539 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ubxn11Q9D572 484 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Poc5Q9DBS8 558 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 GmprQ9DCZ1 345 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc12a4Q9JIS8 1085 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 VarsQ9Z1Q9 1263 aaKnown RBP11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mroh4G3X8W1 983 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Hmgxb3G3X9M3 1254 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Olfr611K7N609 323 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Olfr612L7N462 323 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 NumblO08919 604 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Dnmt3aO88508 908 aaKnown RBP11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pi4k2aQ2TBE6 479 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Lsg1Q3UM18 644 aaKnown RBP11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Samhd1Q60710 627 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 BsndQ8VIM4 307 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Med7Q9CZB6 233 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Borcs6Q9D6W8 360 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 AlpiF8VPQ6 554 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 AlplP09242 524 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 NrlP54846 237 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tfdp2Q64163 446 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Olfr297Q7TS07 310 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cnksr2Q80YA9 1032 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mtrf1lQ8BJU9 373 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 HlcsQ920N2 722 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Clic3Q9D7P7 237 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Asb1Q9WV74 336 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Shcbp1Q9Z179 668 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mtmr1Q9Z2C4 669 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zfp558E9Q1J0 407 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gsta3P30115 221 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 YwhaeP62259 255 aaKnown RBP11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MyrflQ3UN70 904 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Soat1Q61263 540 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cyp3a11Q64459 504 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nudt16Q6P3D0 195 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccdc154Q6RUT8 657 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kcng4Q80XM3 506 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cwf19l2Q8BG79 887 aaKnown RBP11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 EtnpplQ8BWU8 499 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Stk33Q924X7 491 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 IcmtQ9EQK7 283 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Strn3Q9ERG2 796 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 SynrgQ5SV85 1306 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Plcg1Q62077 1302 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Znf536Q8K083 1302 aa11.71□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Slc4a9E9PUP3 929 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Il12bP43432 335 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cdk7Q03147 346 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tars2Q3UQ84 723 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Nqo1Q64669 274 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 MogsQ80UM7 834 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Colgalt1Q8K297 617 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Msi2Q920Q6 346 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tpd52l2Q9CYZ2 220 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rbp7Q9EPC5 134 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ropn1Q9ESG2 212 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dkc1Q9ESX5 509 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 RalbQ9JIW9 206 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mbd1Q9Z2E2 636 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 DldO08749 509 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Drg1P32233 367 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Cst8P32766 142 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ythdf1P59326 559 aaKnown RBP11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Pde1aQ61481 565 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 MregQ6NVG5 214 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 UvragQ8K245 698 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rhobtb2Q91V93 728 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PmpcbQ9CXT8 489 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ifrd2Q9D8U0 441 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ccdc103Q9D9P2 237 aa11.71□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PklrP53657 574 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Actr2P61161 394 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Sycp3P70281 254 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ext2P70428 718 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Ptgs2Q05769 604 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Olfr798Q7TRH8 311 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 TufmQ8BFR5 452 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Smndc1Q8BGT7 238 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Tfb1mQ8JZM0 345 aaKnown RBP11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 QpctQ9CYK2 362 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 PudpQ9D5U5 234 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Hes6Q9JHE6 224 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Rnf14Q9JI90 485 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 DgkeQ9R1C6 564 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Lypla2Q9WTL7 231 aa11.7□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Gipc1Q9Z0G0 333 aa11.7□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms