RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Phf20Q8BLG0 1010 aaKnown RBP10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ppme1Q8BVQ5 386 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Cadm1Q8R5M8 456 aaKnown RBP10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Mfsd5Q921Y4 450 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Prpf19Q99KP6 504 aaKnown RBP10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lztr1Q9CQ33 837 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Lrrc57Q9D1G5 239 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Copg2Q9QXK3 871 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm5145F8VQ88 278 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gm8926L7MUE8 181 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tars2Q3UQ84 723 aaKnown RBP10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Pcnx4Q3UVY5 1174 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Q8BGA7 448 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Gsdmc3Q8CB12 480 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 GaleQ8R059 347 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Tomm70Q9CZW5 611 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Smpd3Q9JJY3 655 aa10.46□□□□□ -0.73
Ubr1-201ENSMUST00000028728 Ahdc1Q6PAL7 1594 aaKnown RBP10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kiaa0556Q8C753 1610 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mageb2A2AHM0 380 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Lipo2D3YY49 398 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zfp882E9Q4R4 555 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sgo2bJ3QMK1 1167 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr611K7N609 323 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr612L7N462 323 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfml2bQ3V1G4 746 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Znf496Q5SXI5 585 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atp13a4Q5XF90 1193 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mrps35Q8BJZ4 320 aaKnown RBP10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sfr1Q8BP27 319 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hacd3Q8K2C9 362 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Spata9Q9D9R3 252 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Arih1Q9Z1K5 555 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 InhbeO08717 350 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc1a6O35544 561 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 StamP70297 548 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tbx3P70324 741 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Eif1adQ3THJ3 170 aaKnown RBP10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rapgefl1Q68EF8 662 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ube3cQ80U95 1083 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Prpf39Q8K2Z2 665 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Haus3Q8QZX2 570 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tmem82Q8R115 356 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 GldcQ91W43 1025 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atp5f1Q9CQQ7 256 aaKnown RBP10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atp13a1Q9EPE9 1200 aaKnown RBP10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Serpinb2P12388 415 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cd180Q62192 661 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rps6kl1Q8R2S1 544 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rasgef1cQ9D300 466 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 AglF8VPN4 1532 aa10.46□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Fam205a1D3YZF6 1314 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 RarbP22605 482 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Uchl4P58321 233 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Akap14Q3V0I7 536 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Epc2Q8C0I4 808 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cfap61Q8CEL2 1252 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sik2Q8CFH6 931 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Cog3Q8CI04 820 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Slc47a1Q8K0H1 567 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pop1Q8K205 1045 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Mtg1Q8R2R6 326 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Hey2Q9QUS4 339 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dthd1E9PZX1 795 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rgs4O08899 205 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfm1O88998 485 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ptpn5P54830 541 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Atg16l2Q6KAU8 623 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Tas2r131Q7M708 310 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Eif3lQ8QZY1 564 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 EtfbQ9DCW4 255 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Scnn1bQ9WU38 638 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Vmn2r121A2BE32 847 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sec22bO08547 215 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 FaxcQ3UMF9 409 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dlg4Q62108 724 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Kcnk18Q6VV64 394 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Zbtb5Q7TQG0 670 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dlg1Q811D0 905 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pcdhga4Q91XY4 930 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ap3m1Q9JKC8 418 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 HaspinQ9Z0R0 754 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm13941A2AJ38 245 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Smad1P70340 465 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sdr16c6Q05A13 316 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Spata5Q3UMC0 893 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr698Q7TRN4 311 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Agap1Q8BXK8 857 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Dnm1lQ8K1M6 742 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gabbr1Q9WV18 960 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Pnpla7A2AJ88 1352 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gm4869A0A1B0GSG7 984 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Rpl21O09167 160 aaKnown RBP10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CtshP49935 333 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Gsdmdc1Q9D8T2 487 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Olfr711Q9EPG2 314 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 CrnnD3YUU6 520 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Ccnb1ip1D3Z3K2 276 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Sstr1P30873 391 aa10.45□□□□□ -0.74
Ubr1-201ENSMUST00000028728 Otol1Q4ZJM7 482 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms