RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Chordc1Q9D1P4 331 aaKnown RBP16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Erp44Q9D1Q6 406 aa16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 4931423N10RikQ9D4J9 382 aa16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Hyou1Q9JKR6 999 aaKnown RBP16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Dnajc7Q9QYI3 494 aa16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Gabbr1Q9WV18 960 aa16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Mcm3apQ9WUU9 1971 aa16.71■□□□□ 0.27
Ubb-201ENSMUST00000019649 Gm28042B7ZCM9 1014 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Spata31E9QAF0 1014 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Ly6aP05533 134 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 PrphP15331 475 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rad54lP70270 747 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 CttnQ60598 546 aaKnown RBP16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Arnt2Q61324 712 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Naif1Q6PFD7 327 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Cacna2d2Q6PHS9 1154 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 C2cd2lQ80X80 706 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Uba3Q8C878 462 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Ccdc17Q8CE13 565 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Tcp11l2Q8K1H7 517 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 RabepkQ8VCH5 380 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Olfr356Q8VFP5 315 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Barhl2Q8VIB5 384 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 Trmt11Q9CWH5 460 aa16.7■□□□□ 0.26
Ubb-201ENSMUST00000019649 5830411N06RikB3F5L4 1112 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 NcapgE9PWG6 1004 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Cdh18E9Q9Q6 790 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Man2b1O09159 1013 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Nr1i3O35627 358 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Men1O88559 611 aaKnown RBP16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 RaraP11416 462 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 HecaQ3V1N5 544 aaKnown RBP16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Afg1lQ3V384 480 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Taar7eQ5QD09 358 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 MslnQ61468 625 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Tmem108Q8BHE4 574 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Slc26a6Q8CIW6 758 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gtpbp4Q99ME9 634 aaKnown RBP16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gadd45gip1Q9CR59 222 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rin2Q9D684 903 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gtf3c6Q9D8P7 227 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 PapolbQ9WVP6 641 aa16.69■□□□□ 0.26
Ubb-201ENSMUST00000019649 0610012G03RikA0A0J9YTR2 95 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gm21293E9Q4G9 266 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Spata31d1dE9Q5W2 1247 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Olfr1022L7MTT3 315 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Ebf3O08791 596 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 ByslO54825 436 aaKnown RBP16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Impa1O55023 277 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Acot1O55137 419 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Ptgs1P22437 602 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 CremP27699 357 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Folr1P35846 255 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 CidecP56198 239 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Dpcr1Q3TNW5 500 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 CtcfQ61164 736 aaKnown RBP16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Sorbs1Q62417 1290 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Tlr13Q6R5N8 991 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Olfr26Q7TRB7 308 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Ppp2r2cQ8BG02 447 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Tusc3Q8BTV1 347 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Slc9a4Q8BUE1 797 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Tmx4Q8C0L0 335 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Znf276Q8CE64 614 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 PdxkQ8K183 312 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Klhl20Q8VCK5 604 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Lysmd3Q99LE3 305 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Mrpl2Q9D773 306 aaKnown RBP16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Olfr933Q9EQA0 308 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Cyp39a1Q9JKJ9 470 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 IkbkeQ9R0T8 717 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rasgrp1Q9Z1S3 795 aa16.68■□□□□ 0.26
Ubb-201ENSMUST00000019649 Lcn6A2AJB9 181 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Zfp990B1AVN5 605 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rad51ap2G3UW63 976 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Sdc4O35988 198 aaKnown RBP16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 CtssO70370 340 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rrm1P07742 792 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Hrh2P97292 397 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Eri2Q5BKS4 688 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Adat2Q6P6J0 191 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Epn1Q80VP1 575 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Q80ZQ3 298 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Adam29Q811Q4 763 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Smoc1Q8BLY1 463 aaKnown RBP16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Abi3Q8BYZ1 367 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Mill2Q8HWE5 355 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Stap2Q8R0L1 411 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gramd1aQ8VEF1 722 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Pcdhgb1Q91XX8 918 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Fam174aQ9D3L0 190 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Necab3Q9D6J4 353 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rpl4Q9D8E6 419 aaKnown RBP16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Slc2a5Q9WV38 501 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Gm36028A0A0U1RPM1 299 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rfx8D3YU81 596 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Senp1P59110 640 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Pi4k2aQ2TBE6 479 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 Rmdn3Q3UJU9 470 aa16.67■□□□□ 0.26
Ubb-201ENSMUST00000019649 L1td1Q587J6 782 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms