RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Olfr615Q8VGY4 313 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Dhx36Q8VHK9 1001 aaKnown RBP19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 SarnpQ9D1J3 210 aaKnown RBP19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Gm3404Q9D506 307 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Oma1Q9D8H7 521 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Dtwd1Q9D8U7 304 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tekt1Q9DAJ2 418 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Zfyve19Q9DAZ9 389 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Bace2Q9JL18 514 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Magel2Q9QZ04 1284 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Magea2Q9R2A2 320 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Vmn2r103E9PWW0 856 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 ChkaO54804 453 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Cdh16O88338 830 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 DmpkP54265 631 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Hace1Q3U0D9 909 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 OtulinQ3UCV8 352 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Cyb5d1Q5NCY3 228 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Got1l1Q7TSV6 404 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tp53inp2Q8CFU8 221 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Plekhh3Q8VCE9 796 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tas1r2Q925I4 843 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Tssk3Q9D2E1 268 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Slc12a4Q9JIS8 1085 aa19.46■□□□□ 0.71
Shkbp1-201ENSMUST00000003857 Kif5aP33175 1027 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Crnkl1P63154 690 aaKnown RBP19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Kpnb1P70168 876 aaKnown RBP19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Arl14Q3SXC5 192 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Sult1d1Q3UZZ6 295 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Grik1Q60934 836 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Foxn1Q61575 648 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tmcc1Q69ZZ6 649 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccnt2Q7TQK0 723 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Rimbp2Q80U40 1072 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Slc38a7Q8BWH0 463 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Dcun1d2Q8BZJ7 259 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 GlmnQ8BZM1 596 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Nsmce3Q9CPR8 279 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Slc13a1Q9JHI4 594 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Limd1Q9QXD8 668 aa19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Polr2aP08775 1970 aaKnown RBP19.45■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Serpini1O35684 410 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Scp2P32020 547 aaKnown RBP19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 EdnrbP48302 442 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Msx3P70354 204 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Mea1Q64327 174 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Cnksr2Q80YA9 1032 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Rcn2Q8BP92 320 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Usp33Q8R5K2 909 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Lrrc73B2RWC4 316 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Kpna7C0LLJ0 499 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Kng1O08677 661 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Bmpr2O35607 1038 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Cops5O35864 334 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gjb1P28230 283 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ranbp9P69566 653 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Stx2Q00262 289 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Traf3Q60803 567 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Grid2Q61625 1007 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Hsph1Q61699 858 aaKnown RBP19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Aldh1a2Q62148 518 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 WtipQ7TQJ8 398 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Chn2Q80XD1 332 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Pcdhb6Q91XZ4 772 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Asb7Q91ZU0 318 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Grk2Q99MK8 689 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Plod1Q9R0E2 728 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Capn7Q9R1S8 813 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Nupr1Q9WTK0 80 aa19.44■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ism2D3Z6A3 493 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tnfrsf11bO08712 401 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Soat2O88908 525 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccnb1P24860 430 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ccr1P51675 355 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Spata20Q80YT5 790 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Pum3Q8BKS9 647 aaKnown RBP19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Mettl21cQ8BLU2 248 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Rev1Q920Q2 1249 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Lrp8Q924X6 996 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 ParvbQ9ES46 365 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Slc8a3S4R2P9 928 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Zfp990B1AVN5 605 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Vmn2r84D3YWE3 849 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Fam172aQ3TNH5 417 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 McuQ3UMR5 350 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ino80dQ66JY2 873 aaKnown RBP19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 ScapQ6GQT6 1276 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 ItpkcQ7TS72 678 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Tubgcp5Q8BKN5 1024 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 CarfQ8VHI4 689 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Cttnbp2nlQ99LJ0 638 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Rpa3Q9CQ71 121 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Drc3Q9D5E4 523 aa19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Atp13a1Q9EPE9 1200 aaKnown RBP19.43■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Morc3F7BJB9 942 aaKnown RBP19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Gnl1P36916 607 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Faf2Q3TDN2 445 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Q3UJP5 209 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 HomezQ80W88 542 aa19.42■□□□□ 0.7
Shkbp1-201ENSMUST00000003857 Ogfod2Q9CQ04 349 aa19.42■□□□□ 0.7
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms