RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 rp9P97762 213 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 RalgdsQ03385 852 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cyp2j11Q3UNV2 504 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rbm44Q3V089 1013 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rhox12Q4TU81 186 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kansl1lQ5DTI6 991 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Krt42Q6IFX2 452 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ints6Q6PCM2 883 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 BC048507Q80ZS7 89 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pcyox1lQ8C7K6 495 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ccdc17Q8CE13 565 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zbtb8bQ8CII0 484 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Stau2Q8CJ67 570 aaKnown RBP9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MyripQ8K3I4 856 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 AdigQ8R400 80 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mzt2Q9CQ25 159 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 4930513O06RikQ9D549 161 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Oma1Q9D8H7 521 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cog8Q9JJA2 640 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Igsf9bE9PZ19 1328 aa9.45□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CpdO89001 1377 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Oas1eA0A0J9YV76 386 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 S100zB9EJL3 99 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r74E9PW21 853 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 PtenO08586 403 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ifrd1P19182 449 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Zfp868Q3UTQ6 422 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nutm2Q3V0C3 733 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Usp7Q6A4J8 1103 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rrm2bQ6PEE3 351 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vcpip1Q8CDG3 1220 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 IlkapQ8R0F6 392 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Klhl36Q8R124 613 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Znf426Q8R1D1 550 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sgsm3Q8VCZ6 750 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Grin3bQ91ZU9 1003 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dyrk1bQ9Z188 629 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Clk2O35491 499 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MyocO70624 490 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Adcy6Q01341 1165 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam198aQ3UY90 562 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Grm4Q68EF4 912 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Slc20a2Q80UP8 656 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Samd4bQ80XS6 687 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pcmtd2Q8BHD8 359 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cops7bQ8BV13 264 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Thop1Q8C1A5 687 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ttc16Q8C1F5 767 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 E2f4Q8R0K9 410 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tdrd1Q99MV1 1172 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rprd1bQ9CSU0 326 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Serbp1Q9CY58 407 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ddx21Q9JIK5 851 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Pitpnm2Q6ZPQ6 1335 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Krt28A6BLY7 462 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm3526E9PZM0 191 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Reps1O54916 795 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Traf2P39429 501 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CamkvQ3UHL1 512 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fam129aQ3UW53 926 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kiaa0319Q5SZV5 1081 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ssxb10Q6XAR7 170 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tas2r109Q7M707 316 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mrgprb8Q7TN51 330 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q80WR5 230 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Plekhm3Q8BM47 761 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Adgra1Q8C4G9 578 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rftn2Q8CHX7 500 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cdc73Q8JZM7 531 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nr3c2Q8VII8 978 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 NgrnQ99KS2 293 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 TpbpbQ9CQC0 121 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 CygbQ9CX80 190 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Cep97Q9CZ62 856 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ankef1Q9D2J7 775 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gemin5Q8BX17 1502 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Dennd5bA2RSQ0 1274 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kif28pD3YXS5 1028 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Erich1E9PY43 332 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Foxm1O08696 760 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tgm2P21981 686 aaKnown RBP9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Esyt3Q5DTI8 891 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Brat1Q8C3R1 822 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q8CIL4 281 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 GOLGA7BQ9D428 167 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hmg20aQ9DC33 346 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 MetP16056 1379 aa9.44□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rfpl4bJ3QPR6 266 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Hmox2O70252 315 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Itga4Q00651 1039 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Fgfr4Q03142 799 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tex24Q5DP50 351 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Foxn1Q61575 648 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Mrps31Q61733 384 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Olfr392Q7TRX6 312 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmcc2Q80W04 706 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ythdf3Q8BYK6 585 aaKnown RBP9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 AagabQ8R2R3 316 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Q922M7 232 aa9.43□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Oxct1Q9D0K2 520 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms