RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ADGRB1	O14514	1584 aa		21.84	■■□□□ 1.09
PHGDH-231	ENST00000641939	PLEKHH1	Q9ULM0	1364 aa		21.84	■■□□□ 1.09
PHGDH-231	ENST00000641939	JCAD	Q9P266	1359 aa		21.82	■■□□□ 1.08
PHGDH-231	ENST00000641939	DLC1	Q96QB1	1528 aa		21.81	■■□□□ 1.08
PHGDH-231	ENST00000641939	SHPRH	Q149N8	1683 aa		21.79	■■□□□ 1.08
PHGDH-231	ENST00000641939	KIAA1210	Q9ULL0	1709 aa		21.78	■■□□□ 1.08
PHGDH-231	ENST00000641939	PHF23	Q9BUL5	403 aa	Predicted RBP	21.78	■■□□□ 1.08
PHGDH-231	ENST00000641939	FMN2	Q9NZ56	1722 aa		21.77	■■□□□ 1.08
PHGDH-231	ENST00000641939	SOCS7	O14512	581 aa		21.77	■■□□□ 1.08
PHGDH-231	ENST00000641939	PRAM1	Q96QH2	718 aa		21.77	■■□□□ 1.08
PHGDH-231	ENST00000641939	ORAI2	Q96SN7	254 aa		21.77	■■□□□ 1.08
PHGDH-231	ENST00000641939	SIN3A	Q96ST3	1273 aa		21.75	■■□□□ 1.07
PHGDH-231	ENST00000641939	POGK	Q9P215	609 aa		21.75	■■□□□ 1.07
PHGDH-231	ENST00000641939	TRAK1	Q9UPV9	953 aa		21.75	■■□□□ 1.07
PHGDH-231	ENST00000641939	SAFB2	Q14151	953 aa	Known RBP eCLIP	21.74	■■□□□ 1.07
PHGDH-231	ENST00000641939	DDX17	Q92841	729 aa	Known RBP	21.74	■■□□□ 1.07
PHGDH-231	ENST00000641939	ARHGEF28	Q8N1W1	1705 aa	Known RBP	21.72	■■□□□ 1.07
PHGDH-231	ENST00000641939	RGPD8	O14715	1765 aa	Predicted RBP	21.72	■■□□□ 1.07
PHGDH-231	ENST00000641939	NEUROD1	Q13562	356 aa		21.72	■■□□□ 1.07
PHGDH-231	ENST00000641939	ESCO1	Q5FWF5	840 aa		21.72	■■□□□ 1.07
PHGDH-231	ENST00000641939	SPATA31A6	Q5VVP1	1343 aa		21.72	■■□□□ 1.07
PHGDH-231	ENST00000641939	NUTM2F	A1L443	756 aa		21.71	■■□□□ 1.07
PHGDH-231	ENST00000641939	L3MBTL2	Q969R5	705 aa		21.71	■■□□□ 1.07
PHGDH-231	ENST00000641939	LRRC59	Q96AG4	307 aa	Known RBP	21.71	■■□□□ 1.07
PHGDH-231	ENST00000641939	ADGRB2	O60241	1585 aa		21.7	■■□□□ 1.06
PHGDH-231	ENST00000641939	SOS2	Q07890	1332 aa	Predicted RBP	21.68	■■□□□ 1.06
PHGDH-231	ENST00000641939	KIF1A	Q12756	1690 aa		21.67	■■□□□ 1.06
PHGDH-231	ENST00000641939	LRP6	O75581	1613 aa		21.66	■■□□□ 1.06
PHGDH-231	ENST00000641939	NPHP3	Q7Z494	1330 aa		21.66	■■□□□ 1.06
PHGDH-231	ENST00000641939	MINK1	Q8N4C8	1332 aa	Predicted RBP	21.65	■■□□□ 1.06
PHGDH-231	ENST00000641939	NBPF1	Q3BBV0	1214 aa		21.65	■■□□□ 1.06
PHGDH-231	ENST00000641939	PNPLA6	Q8IY17	1366 aa		21.64	■■□□□ 1.06
PHGDH-231	ENST00000641939	HIRIP3	Q9BW71	556 aa	Predicted RBP	21.64	■■□□□ 1.05
PHGDH-231	ENST00000641939	RGS17	Q9UGC6	210 aa	Predicted RBP	21.64	■■□□□ 1.05
PHGDH-231	ENST00000641939	USP32	Q8NFA0	1604 aa		21.63	■■□□□ 1.05
PHGDH-231	ENST00000641939	FOXO3	O43524	673 aa		21.63	■■□□□ 1.05
PHGDH-231	ENST00000641939	PXDN	Q92626	1479 aa		21.63	■■□□□ 1.05
PHGDH-231	ENST00000641939	ANKAR	Q7Z5J8	1434 aa		21.63	■■□□□ 1.05
PHGDH-231	ENST00000641939	TRPM1	Q7Z4N2	1603 aa		21.62	■■□□□ 1.05
PHGDH-231	ENST00000641939	MEX3C	Q5U5Q3	659 aa	Known RBP	21.62	■■□□□ 1.05
PHGDH-231	ENST00000641939	NUTM2B	A6NNL0	878 aa	Predicted RBP	21.61	■■□□□ 1.05
PHGDH-231	ENST00000641939	NUTM2E	B1AL46	878 aa	Predicted RBP	21.61	■■□□□ 1.05
PHGDH-231	ENST00000641939	NUTM2A	Q8IVF1	878 aa	Predicted RBP	21.61	■■□□□ 1.05
PHGDH-231	ENST00000641939	EIF3A	Q14152	1382 aa	Known RBP	21.61	■■□□□ 1.05
PHGDH-231	ENST00000641939	PHF8	Q9UPP1	1060 aa		21.6	■■□□□ 1.05
PHGDH-231	ENST00000641939	WASL	O00401	505 aa	Predicted RBP	21.59	■■□□□ 1.05
PHGDH-231	ENST00000641939	XPC	Q01831	940 aa	Predicted RBP	21.59	■■□□□ 1.05
PHGDH-231	ENST00000641939	TULP4	Q9NRJ4	1543 aa		21.59	■■□□□ 1.05
PHGDH-231	ENST00000641939	COL22A1	Q8NFW1	1626 aa	Predicted RBP	21.58	■■□□□ 1.05
PHGDH-231	ENST00000641939	TONSL	Q96HA7	1378 aa		21.56	■■□□□ 1.04
PHGDH-231	ENST00000641939	ITSN1	Q15811	1721 aa		21.55	■■□□□ 1.04
PHGDH-231	ENST00000641939	POTEA	Q6S8J7	498 aa		21.54	■■□□□ 1.04
PHGDH-231	ENST00000641939	KRT28	Q7Z3Y7	464 aa		21.54	■■□□□ 1.04
PHGDH-231	ENST00000641939	PRR36	Q9H6K5	1346 aa		21.54	■■□□□ 1.04
PHGDH-231	ENST00000641939	QRICH2	Q9H0J4	1663 aa		21.53	■■□□□ 1.04
PHGDH-231	ENST00000641939	ROCK2	O75116	1388 aa	Known RBP	21.53	■■□□□ 1.04
PHGDH-231	ENST00000641939	PMFBP1	Q8TBY8	1022 aa		21.53	■■□□□ 1.04
PHGDH-231	ENST00000641939	CENPJ	Q9HC77	1338 aa	Predicted RBP	21.53	■■□□□ 1.04
PHGDH-231	ENST00000641939	PSME1	Q06323	249 aa		21.52	■■□□□ 1.04
PHGDH-231	ENST00000641939	NBPF8	Q3BBV2	869 aa		21.51	■■□□□ 1.03
PHGDH-231	ENST00000641939	ZNF772	Q68DY9	489 aa	Predicted RBP	21.51	■■□□□ 1.03
PHGDH-231	ENST00000641939	CDK19	Q9BWU1	502 aa		21.51	■■□□□ 1.03
PHGDH-231	ENST00000641939	SPATA31A3	Q5VYP0	1347 aa		21.51	■■□□□ 1.03
PHGDH-231	ENST00000641939	ATP7B	P35670	1465 aa		21.51	■■□□□ 1.03
PHGDH-231	ENST00000641939	NUDT16	Q96DE0	195 aa	Known RBP	21.49	■■□□□ 1.03
PHGDH-231	ENST00000641939	C8orf37	Q96NL8	207 aa		21.49	■■□□□ 1.03
PHGDH-231	ENST00000641939	PCGF6	Q9BYE7	350 aa		21.49	■■□□□ 1.03
PHGDH-231	ENST00000641939	MARF1	Q9Y4F3	1742 aa	Known RBP	21.49	■■□□□ 1.03
PHGDH-231	ENST00000641939	ADAMTS2	O95450	1211 aa		21.48	■■□□□ 1.03
PHGDH-231	ENST00000641939	AFF2	P51816	1311 aa		21.48	■■□□□ 1.03
PHGDH-231	ENST00000641939	SBNO1	A3KN83	1393 aa		21.48	■■□□□ 1.03
PHGDH-231	ENST00000641939	TNS3	Q68CZ2	1445 aa		21.47	■■□□□ 1.03
PHGDH-231	ENST00000641939	TOPAZ1	Q8N9V7	1692 aa		21.47	■■□□□ 1.03
PHGDH-231	ENST00000641939	TRPM3	Q9HCF6	1732 aa	Predicted RBP	21.47	■■□□□ 1.03
PHGDH-231	ENST00000641939	GPRASP1	Q5JY77	1395 aa		21.47	■■□□□ 1.03
PHGDH-231	ENST00000641939	NGDN	Q8NEJ9	315 aa	Known RBP	21.45	■■□□□ 1.02
PHGDH-231	ENST00000641939	NGLY1	Q96IV0	654 aa		21.44	■■□□□ 1.02
PHGDH-231	ENST00000641939	ARHGEF10	O15013	1369 aa		21.44	■■□□□ 1.02
PHGDH-231	ENST00000641939	RALGAPB	Q86X10	1494 aa		21.44	■■□□□ 1.02
PHGDH-231	ENST00000641939	ALS2	Q96Q42	1657 aa		21.43	■■□□□ 1.02
PHGDH-231	ENST00000641939	SRPK2	P78362	688 aa	Known RBP	21.42	■■□□□ 1.02
PHGDH-231	ENST00000641939	LMOD2	Q6P5Q4	547 aa		21.42	■■□□□ 1.02
PHGDH-231	ENST00000641939	CCDC61	Q9Y6R9	512 aa		21.42	■■□□□ 1.02
PHGDH-231	ENST00000641939	CARD11	Q9BXL7	1154 aa		21.41	■■□□□ 1.02
PHGDH-231	ENST00000641939	ABCA3	Q99758	1704 aa		21.41	■■□□□ 1.02
PHGDH-231	ENST00000641939	CLSPN	Q9HAW4	1339 aa		21.39	■■□□□ 1.01
PHGDH-231	ENST00000641939	PLEKHG3	A1L390	1219 aa		21.39	■■□□□ 1.01
PHGDH-231	ENST00000641939	CABP2	Q9NPB3	220 aa		21.39	■■□□□ 1.01
PHGDH-231	ENST00000641939	POLR3A	O14802	1390 aa	Predicted RBP	21.38	■■□□□ 1.01
PHGDH-231	ENST00000641939	EVC2	Q86UK5	1308 aa		21.38	■■□□□ 1.01
PHGDH-231	ENST00000641939	ACE	P12821	1306 aa		21.37	■■□□□ 1.01
PHGDH-231	ENST00000641939	RXRB	P28702	533 aa		21.37	■■□□□ 1.01
PHGDH-231	ENST00000641939	FNBP4	Q8N3X1	1017 aa	Predicted RBP	21.37	■■□□□ 1.01
PHGDH-231	ENST00000641939	QTRT2	Q9H974	415 aa	Known RBP	21.37	■■□□□ 1.01
PHGDH-231	ENST00000641939	PPIP5K1	Q6PFW1	1433 aa		21.37	■■□□□ 1.01
PHGDH-231	ENST00000641939	PAK3	O75914	559 aa	Predicted RBP	21.36	■■□□□ 1.01
PHGDH-231	ENST00000641939	HAP1	P54257	671 aa	Predicted RBP	21.36	■■□□□ 1.01
PHGDH-231	ENST00000641939	CABLES1	Q8TDN4	633 aa		21.36	■■□□□ 1.01
PHGDH-231	ENST00000641939	USP21	Q9UK80	565 aa		21.36	■■□□□ 1.01
PHGDH-231	ENST00000641939	PLEKHG5	O94827	1062 aa		21.34	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms