RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ADGRB1O14514 1584 aa21.84■■□□□ 1.09
PHGDH-231ENST00000641939 PLEKHH1Q9ULM0 1364 aa21.84■■□□□ 1.09
PHGDH-231ENST00000641939 JCADQ9P266 1359 aa21.82■■□□□ 1.08
PHGDH-231ENST00000641939 DLC1Q96QB1 1528 aa21.81■■□□□ 1.08
PHGDH-231ENST00000641939 SHPRHQ149N8 1683 aa21.79■■□□□ 1.08
PHGDH-231ENST00000641939 KIAA1210Q9ULL0 1709 aa21.78■■□□□ 1.08
PHGDH-231ENST00000641939 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
PHGDH-231ENST00000641939 FMN2Q9NZ56 1722 aa21.77■■□□□ 1.08
PHGDH-231ENST00000641939 SOCS7O14512 581 aa21.77■■□□□ 1.08
PHGDH-231ENST00000641939 PRAM1Q96QH2 718 aa21.77■■□□□ 1.08
PHGDH-231ENST00000641939 ORAI2Q96SN7 254 aa21.77■■□□□ 1.08
PHGDH-231ENST00000641939 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
PHGDH-231ENST00000641939 POGKQ9P215 609 aa21.75■■□□□ 1.07
PHGDH-231ENST00000641939 TRAK1Q9UPV9 953 aa21.75■■□□□ 1.07
PHGDH-231ENST00000641939 SAFB2Q14151 953 aaKnown RBP eCLIP21.74■■□□□ 1.07
PHGDH-231ENST00000641939 DDX17Q92841 729 aaKnown RBP21.74■■□□□ 1.07
PHGDH-231ENST00000641939 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
PHGDH-231ENST00000641939 RGPD8O14715 1765 aaPredicted RBP21.72■■□□□ 1.07
PHGDH-231ENST00000641939 NEUROD1Q13562 356 aa21.72■■□□□ 1.07
PHGDH-231ENST00000641939 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
PHGDH-231ENST00000641939 SPATA31A6Q5VVP1 1343 aa21.72■■□□□ 1.07
PHGDH-231ENST00000641939 NUTM2FA1L443 756 aa21.71■■□□□ 1.07
PHGDH-231ENST00000641939 L3MBTL2Q969R5 705 aa21.71■■□□□ 1.07
PHGDH-231ENST00000641939 LRRC59Q96AG4 307 aaKnown RBP21.71■■□□□ 1.07
PHGDH-231ENST00000641939 ADGRB2O60241 1585 aa21.7■■□□□ 1.06
PHGDH-231ENST00000641939 SOS2Q07890 1332 aaPredicted RBP21.68■■□□□ 1.06
PHGDH-231ENST00000641939 KIF1AQ12756 1690 aa21.67■■□□□ 1.06
PHGDH-231ENST00000641939 LRP6O75581 1613 aa21.66■■□□□ 1.06
PHGDH-231ENST00000641939 NPHP3Q7Z494 1330 aa21.66■■□□□ 1.06
PHGDH-231ENST00000641939 MINK1Q8N4C8 1332 aaPredicted RBP21.65■■□□□ 1.06
PHGDH-231ENST00000641939 NBPF1Q3BBV0 1214 aa21.65■■□□□ 1.06
PHGDH-231ENST00000641939 PNPLA6Q8IY17 1366 aa21.64■■□□□ 1.06
PHGDH-231ENST00000641939 HIRIP3Q9BW71 556 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-231ENST00000641939 RGS17Q9UGC6 210 aaPredicted RBP21.64■■□□□ 1.05
PHGDH-231ENST00000641939 USP32Q8NFA0 1604 aa21.63■■□□□ 1.05
PHGDH-231ENST00000641939 FOXO3O43524 673 aa21.63■■□□□ 1.05
PHGDH-231ENST00000641939 PXDNQ92626 1479 aa21.63■■□□□ 1.05
PHGDH-231ENST00000641939 ANKARQ7Z5J8 1434 aa21.63■■□□□ 1.05
PHGDH-231ENST00000641939 TRPM1Q7Z4N2 1603 aa21.62■■□□□ 1.05
PHGDH-231ENST00000641939 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
PHGDH-231ENST00000641939 NUTM2BA6NNL0 878 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-231ENST00000641939 NUTM2EB1AL46 878 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-231ENST00000641939 NUTM2AQ8IVF1 878 aaPredicted RBP21.61■■□□□ 1.05
PHGDH-231ENST00000641939 EIF3AQ14152 1382 aaKnown RBP21.61■■□□□ 1.05
PHGDH-231ENST00000641939 PHF8Q9UPP1 1060 aa21.6■■□□□ 1.05
PHGDH-231ENST00000641939 WASLO00401 505 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-231ENST00000641939 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
PHGDH-231ENST00000641939 TULP4Q9NRJ4 1543 aa21.59■■□□□ 1.05
PHGDH-231ENST00000641939 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.05
PHGDH-231ENST00000641939 TONSLQ96HA7 1378 aa21.56■■□□□ 1.04
PHGDH-231ENST00000641939 ITSN1Q15811 1721 aa21.55■■□□□ 1.04
PHGDH-231ENST00000641939 POTEAQ6S8J7 498 aa21.54■■□□□ 1.04
PHGDH-231ENST00000641939 KRT28Q7Z3Y7 464 aa21.54■■□□□ 1.04
PHGDH-231ENST00000641939 PRR36Q9H6K5 1346 aa21.54■■□□□ 1.04
PHGDH-231ENST00000641939 QRICH2Q9H0J4 1663 aa21.53■■□□□ 1.04
PHGDH-231ENST00000641939 ROCK2O75116 1388 aaKnown RBP21.53■■□□□ 1.04
PHGDH-231ENST00000641939 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
PHGDH-231ENST00000641939 CENPJQ9HC77 1338 aaPredicted RBP21.53■■□□□ 1.04
PHGDH-231ENST00000641939 PSME1Q06323 249 aa21.52■■□□□ 1.04
PHGDH-231ENST00000641939 NBPF8Q3BBV2 869 aa21.51■■□□□ 1.03
PHGDH-231ENST00000641939 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
PHGDH-231ENST00000641939 CDK19Q9BWU1 502 aa21.51■■□□□ 1.03
PHGDH-231ENST00000641939 SPATA31A3Q5VYP0 1347 aa21.51■■□□□ 1.03
PHGDH-231ENST00000641939 ATP7BP35670 1465 aa21.51■■□□□ 1.03
PHGDH-231ENST00000641939 NUDT16Q96DE0 195 aaKnown RBP21.49■■□□□ 1.03
PHGDH-231ENST00000641939 C8orf37Q96NL8 207 aa21.49■■□□□ 1.03
PHGDH-231ENST00000641939 PCGF6Q9BYE7 350 aa21.49■■□□□ 1.03
PHGDH-231ENST00000641939 MARF1Q9Y4F3 1742 aaKnown RBP21.49■■□□□ 1.03
PHGDH-231ENST00000641939 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
PHGDH-231ENST00000641939 AFF2P51816 1311 aa21.48■■□□□ 1.03
PHGDH-231ENST00000641939 SBNO1A3KN83 1393 aa21.48■■□□□ 1.03
PHGDH-231ENST00000641939 TNS3Q68CZ2 1445 aa21.47■■□□□ 1.03
PHGDH-231ENST00000641939 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
PHGDH-231ENST00000641939 TRPM3Q9HCF6 1732 aaPredicted RBP21.47■■□□□ 1.03
PHGDH-231ENST00000641939 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
PHGDH-231ENST00000641939 NGDNQ8NEJ9 315 aaKnown RBP21.45■■□□□ 1.02
PHGDH-231ENST00000641939 NGLY1Q96IV0 654 aa21.44■■□□□ 1.02
PHGDH-231ENST00000641939 ARHGEF10O15013 1369 aa21.44■■□□□ 1.02
PHGDH-231ENST00000641939 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
PHGDH-231ENST00000641939 ALS2Q96Q42 1657 aa21.43■■□□□ 1.02
PHGDH-231ENST00000641939 SRPK2P78362 688 aaKnown RBP21.42■■□□□ 1.02
PHGDH-231ENST00000641939 LMOD2Q6P5Q4 547 aa21.42■■□□□ 1.02
PHGDH-231ENST00000641939 CCDC61Q9Y6R9 512 aa21.42■■□□□ 1.02
PHGDH-231ENST00000641939 CARD11Q9BXL7 1154 aa21.41■■□□□ 1.02
PHGDH-231ENST00000641939 ABCA3Q99758 1704 aa21.41■■□□□ 1.02
PHGDH-231ENST00000641939 CLSPNQ9HAW4 1339 aa21.39■■□□□ 1.01
PHGDH-231ENST00000641939 PLEKHG3A1L390 1219 aa21.39■■□□□ 1.01
PHGDH-231ENST00000641939 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
PHGDH-231ENST00000641939 POLR3AO14802 1390 aaPredicted RBP21.38■■□□□ 1.01
PHGDH-231ENST00000641939 EVC2Q86UK5 1308 aa21.38■■□□□ 1.01
PHGDH-231ENST00000641939 ACEP12821 1306 aa21.37■■□□□ 1.01
PHGDH-231ENST00000641939 RXRBP28702 533 aa21.37■■□□□ 1.01
PHGDH-231ENST00000641939 FNBP4Q8N3X1 1017 aaPredicted RBP21.37■■□□□ 1.01
PHGDH-231ENST00000641939 QTRT2Q9H974 415 aaKnown RBP21.37■■□□□ 1.01
PHGDH-231ENST00000641939 PPIP5K1Q6PFW1 1433 aa21.37■■□□□ 1.01
PHGDH-231ENST00000641939 PAK3O75914 559 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-231ENST00000641939 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
PHGDH-231ENST00000641939 CABLES1Q8TDN4 633 aa21.36■■□□□ 1.01
PHGDH-231ENST00000641939 USP21Q9UK80 565 aa21.36■■□□□ 1.01
PHGDH-231ENST00000641939 PLEKHG5O94827 1062 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms