RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
RBFOX1-224ENST00000641259 TMF1P82094 1093 aa15.43■□□□□ 0.06
RBFOX1-224ENST00000641259 MYO3AQ8NEV4 1616 aa15.43■□□□□ 0.06
RBFOX1-224ENST00000641259 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
RBFOX1-224ENST00000641259 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
RBFOX1-224ENST00000641259 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
RBFOX1-224ENST00000641259 PLIN1O60240 522 aa15.41■□□□□ 0.06
RBFOX1-224ENST00000641259 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
RBFOX1-224ENST00000641259 RPGRIP1LQ68CZ1 1315 aa15.41■□□□□ 0.06
RBFOX1-224ENST00000641259 PANK3Q9H999 370 aa15.4■□□□□ 0.06
RBFOX1-224ENST00000641259 TRAK1Q9UPV9 953 aa15.4■□□□□ 0.06
RBFOX1-224ENST00000641259 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
RBFOX1-224ENST00000641259 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
RBFOX1-224ENST00000641259 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
RBFOX1-224ENST00000641259 ZMYM3Q14202 1370 aa15.38■□□□□ 0.05
RBFOX1-224ENST00000641259 ARHGEF28Q8N1W1 1705 aaKnown RBP15.38■□□□□ 0.05
RBFOX1-224ENST00000641259 PPP6R1Q9UPN7 881 aa15.38■□□□□ 0.05
RBFOX1-224ENST00000641259 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-224ENST00000641259 A2ML1A8K2U0 1454 aa15.37■□□□□ 0.05
RBFOX1-224ENST00000641259 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
RBFOX1-224ENST00000641259 FAM43AQ8N2R8 423 aa15.37■□□□□ 0.05
RBFOX1-224ENST00000641259 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-224ENST00000641259 TRIM44Q96DX7 344 aaPredicted RBP15.36■□□□□ 0.05
RBFOX1-224ENST00000641259 ZFYVE9O95405 1425 aa15.35■□□□□ 0.05
RBFOX1-224ENST00000641259 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
RBFOX1-224ENST00000641259 CC2D1BQ5T0F9 858 aaKnown RBP15.35■□□□□ 0.05
RBFOX1-224ENST00000641259 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
RBFOX1-224ENST00000641259 POGKQ9P215 609 aa15.34■□□□□ 0.05
RBFOX1-224ENST00000641259 CENPJQ9HC77 1338 aaPredicted RBP15.33■□□□□ 0.04
RBFOX1-224ENST00000641259 ALKQ9UM73 1620 aa15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 RRAGDQ9NQL2 400 aaPredicted RBP15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 PTPRMP28827 1452 aa15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 KTN1Q86UP2 1357 aaKnown RBP15.31■□□□□ 0.04
RBFOX1-224ENST00000641259 SBNO2Q9Y2G9 1366 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 RBM10P98175 930 aaKnown RBP15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 STAG3Q9UJ98 1225 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 TULP4Q9NRJ4 1543 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 ZBED9Q6R2W3 1325 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 STK26Q9P289 416 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 NRXN3Q9Y4C0 1643 aa15.3■□□□□ 0.04
RBFOX1-224ENST00000641259 SAFB2Q14151 953 aaKnown RBP eCLIP15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 RIMS2Q9UQ26 1411 aa15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 RALBP1Q15311 655 aa15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 PNISRQ8TF01 805 aaKnown RBP15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 BACH2Q9BYV9 841 aa15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
RBFOX1-224ENST00000641259 UBR1Q8IWV7 1749 aa15.28■□□□□ 0.04
RBFOX1-224ENST00000641259 C3P01024 1663 aa15.28■□□□□ 0.04
RBFOX1-224ENST00000641259 CARD14Q9BXL6 1004 aa15.28■□□□□ 0.04
RBFOX1-224ENST00000641259 TNRQ92752 1358 aa15.27■□□□□ 0.03
RBFOX1-224ENST00000641259 CDCA8Q53HL2 280 aa15.26■□□□□ 0.03
RBFOX1-224ENST00000641259 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
RBFOX1-224ENST00000641259 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
RBFOX1-224ENST00000641259 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
RBFOX1-224ENST00000641259 PLPPR3Q6T4P5 718 aa15.25■□□□□ 0.03
RBFOX1-224ENST00000641259 FAM13BQ9NYF5 915 aa15.25■□□□□ 0.03
RBFOX1-224ENST00000641259 RCAN3Q9UKA8 241 aa15.25■□□□□ 0.03
RBFOX1-224ENST00000641259 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
RBFOX1-224ENST00000641259 L1TD1Q5T7N2 865 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-224ENST00000641259 LRPPRCP42704 1394 aaKnown RBP15.24■□□□□ 0.03
RBFOX1-224ENST00000641259 GOLGA6L3A6NEY3 463 aa15.24■□□□□ 0.03
RBFOX1-224ENST00000641259 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
RBFOX1-224ENST00000641259 KNSTRNQ9Y448 316 aa15.23■□□□□ 0.03
RBFOX1-224ENST00000641259 NLRP13Q86W25 1043 aa15.22■□□□□ 0.03
RBFOX1-224ENST00000641259 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
RBFOX1-224ENST00000641259 DNAJC5Q9H3Z4 198 aa15.22■□□□□ 0.03
RBFOX1-224ENST00000641259 CABP2Q9NPB3 220 aa15.21■□□□□ 0.03
RBFOX1-224ENST00000641259 METP08581 1390 aa15.21■□□□□ 0.03
RBFOX1-224ENST00000641259 PLEKHH1Q9ULM0 1364 aa15.2■□□□□ 0.02
RBFOX1-224ENST00000641259 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
RBFOX1-224ENST00000641259 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
RBFOX1-224ENST00000641259 RRP9O43818 475 aaKnown RBP15.2■□□□□ 0.02
RBFOX1-224ENST00000641259 PANK2Q9BZ23 570 aa15.2■□□□□ 0.02
RBFOX1-224ENST00000641259 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
RBFOX1-224ENST00000641259 RRP1P56182 461 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-224ENST00000641259 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
RBFOX1-224ENST00000641259 TMEM2Q9UHN6 1383 aa15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 WAPLQ7Z5K2 1190 aa15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 CRBNQ96SW2 442 aa15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 ZHX1Q9UKY1 873 aaPredicted RBP15.18■□□□□ 0.02
RBFOX1-224ENST00000641259 LTKP29376 864 aa15.17■□□□□ 0.02
RBFOX1-224ENST00000641259 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
RBFOX1-224ENST00000641259 EVC2Q86UK5 1308 aa15.17■□□□□ 0.02
RBFOX1-224ENST00000641259 BECN1Q14457 450 aa15.16■□□□□ 0.02
RBFOX1-224ENST00000641259 PDE4CQ08493 712 aa15.15■□□□□ 0.02
RBFOX1-224ENST00000641259 ANP32BQ92688 251 aaKnown RBP15.15■□□□□ 0.02
RBFOX1-224ENST00000641259 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
RBFOX1-224ENST00000641259 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
RBFOX1-224ENST00000641259 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
RBFOX1-224ENST00000641259 ADAMTS13Q76LX8 1427 aa15.14■□□□□ 0.01
RBFOX1-224ENST00000641259 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
RBFOX1-224ENST00000641259 RIMS1Q86UR5 1692 aaKnown RBP15.13■□□□□ 0.01
RBFOX1-224ENST00000641259 UPF2Q9HAU5 1272 aaKnown RBP15.13■□□□□ 0.01
RBFOX1-224ENST00000641259 CDCA7LQ96GN5 454 aa15.13■□□□□ 0.01
RBFOX1-224ENST00000641259 SRPK2P78362 688 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 330.5 ms