RNA–Protein interactions for RNA: ENST00000640909.1

KCNC1-213, Transcript of potassium voltage-gated channel subfamily C member 1, humanhuman

TSL 5

Gene KCNC1, Length 1,270 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1-213ENST00000640909 GLI3P10071 1580 aa22.67■■□□□ 1.22
KCNC1-213ENST00000640909 PXDNQ92626 1479 aa22.66■■□□□ 1.22
KCNC1-213ENST00000640909 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
KCNC1-213ENST00000640909 RALGAPBQ86X10 1494 aa22.65■■□□□ 1.22
KCNC1-213ENST00000640909 NUP155O75694 1391 aa22.64■■□□□ 1.22
KCNC1-213ENST00000640909 CDC42BPGQ6DT37 1551 aa22.64■■□□□ 1.22
KCNC1-213ENST00000640909 SF3B2Q13435 895 aaKnown RBP22.64■■□□□ 1.21
KCNC1-213ENST00000640909 ZNF326Q5BKZ1 582 aaKnown RBP22.64■■□□□ 1.21
KCNC1-213ENST00000640909 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
KCNC1-213ENST00000640909 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.21
KCNC1-213ENST00000640909 SLIT2O94813 1529 aa22.63■■□□□ 1.21
KCNC1-213ENST00000640909 ROBO2Q9HCK4 1378 aa22.62■■□□□ 1.21
KCNC1-213ENST00000640909 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
KCNC1-213ENST00000640909 DEFB132Q7Z7B7 95 aa22.59■■□□□ 1.21
KCNC1-213ENST00000640909 LRPPRCP42704 1394 aaKnown RBP22.59■■□□□ 1.21
KCNC1-213ENST00000640909 KIF1BO60333 1816 aa22.59■■□□□ 1.21
KCNC1-213ENST00000640909 CLTCL1P53675 1640 aa22.58■■□□□ 1.21
KCNC1-213ENST00000640909 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
KCNC1-213ENST00000640909 NWD2Q9ULI1 1742 aa22.55■■□□□ 1.2
KCNC1-213ENST00000640909 ESCO1Q5FWF5 840 aa22.53■■□□□ 1.2
KCNC1-213ENST00000640909 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
KCNC1-213ENST00000640909 HRCP23327 699 aa22.52■■□□□ 1.2
KCNC1-213ENST00000640909 VGFO15240 615 aaPredicted RBP22.51■■□□□ 1.19
KCNC1-213ENST00000640909 KIF1AQ12756 1690 aa22.51■■□□□ 1.19
KCNC1-213ENST00000640909 PLCH1Q4KWH8 1693 aa22.49■■□□□ 1.19
KCNC1-213ENST00000640909 ONECUT3O60422 494 aaPredicted RBP22.49■■□□□ 1.19
KCNC1-213ENST00000640909 BAG6P46379 1132 aa22.49■■□□□ 1.19
KCNC1-213ENST00000640909 SEPT12Q8IYM1 358 aa22.49■■□□□ 1.19
KCNC1-213ENST00000640909 VPS72Q15906 364 aa22.48■■□□□ 1.19
KCNC1-213ENST00000640909 CCDC144AA2RUR9 1427 aa22.48■■□□□ 1.19
KCNC1-213ENST00000640909 FOXO3O43524 673 aa22.47■■□□□ 1.19
KCNC1-213ENST00000640909 RGPD1P0DJD0 1748 aa22.47■■□□□ 1.19
KCNC1-213ENST00000640909 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
KCNC1-213ENST00000640909 SPATA31A3Q5VYP0 1347 aa22.45■■□□□ 1.18
KCNC1-213ENST00000640909 PSDA5PKW4 1024 aaPredicted RBP22.44■■□□□ 1.18
KCNC1-213ENST00000640909 PPLO60437 1756 aa22.44■■□□□ 1.18
KCNC1-213ENST00000640909 NAIPQ13075 1403 aa22.43■■□□□ 1.18
KCNC1-213ENST00000640909 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
KCNC1-213ENST00000640909 DISP2A7MBM2 1401 aa22.42■■□□□ 1.18
KCNC1-213ENST00000640909 TECPR2O15040 1411 aa22.42■■□□□ 1.18
KCNC1-213ENST00000640909 XPCQ01831 940 aaPredicted RBP22.42■■□□□ 1.18
KCNC1-213ENST00000640909 ABCA3Q99758 1704 aa22.42■■□□□ 1.18
KCNC1-213ENST00000640909 FMN2Q9NZ56 1722 aa22.42■■□□□ 1.18
KCNC1-213ENST00000640909 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
KCNC1-213ENST00000640909 TNS3Q68CZ2 1445 aa22.39■■□□□ 1.17
KCNC1-213ENST00000640909 NRAPQ86VF7 1730 aa22.37■■□□□ 1.17
KCNC1-213ENST00000640909 TNS1Q9HBL0 1735 aaKnown RBP22.36■■□□□ 1.17
KCNC1-213ENST00000640909 ADGRB2O60241 1585 aa22.35■■□□□ 1.17
KCNC1-213ENST00000640909 HAP1P54257 671 aaPredicted RBP22.35■■□□□ 1.17
KCNC1-213ENST00000640909 CCDC9Q9Y3X0 531 aaKnown RBP22.35■■□□□ 1.17
KCNC1-213ENST00000640909 ARHGEF10O15013 1369 aa22.32■■□□□ 1.16
KCNC1-213ENST00000640909 SBNO1A3KN83 1393 aa22.31■■□□□ 1.16
KCNC1-213ENST00000640909 YY1P25490 414 aa22.31■■□□□ 1.16
KCNC1-213ENST00000640909 KRT28Q7Z3Y7 464 aa22.31■■□□□ 1.16
KCNC1-213ENST00000640909 IFT172Q9UG01 1749 aa22.31■■□□□ 1.16
KCNC1-213ENST00000640909 EN1Q05925 392 aaPredicted RBP22.3■■□□□ 1.16
KCNC1-213ENST00000640909 PSME1Q06323 249 aa22.3■■□□□ 1.16
KCNC1-213ENST00000640909 R3HDM1Q15032 1099 aaKnown RBP22.3■■□□□ 1.16
KCNC1-213ENST00000640909 ABCC11Q96J66 1382 aa22.28■■□□□ 1.16
KCNC1-213ENST00000640909 THSD7AQ9UPZ6 1657 aa22.28■■□□□ 1.16
KCNC1-213ENST00000640909 A0A0G2JS52 829 aa22.28■■□□□ 1.16
KCNC1-213ENST00000640909 MYT1Q01538 1121 aa22.28■■□□□ 1.16
KCNC1-213ENST00000640909 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
KCNC1-213ENST00000640909 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
KCNC1-213ENST00000640909 PARD3Q8TEW0 1356 aa22.27■■□□□ 1.16
KCNC1-213ENST00000640909 NUTM2FA1L443 756 aa22.27■■□□□ 1.16
KCNC1-213ENST00000640909 RGPD8O14715 1765 aaPredicted RBP22.25■■□□□ 1.15
KCNC1-213ENST00000640909 FAM98CQ17RN3 349 aaKnown RBP22.25■■□□□ 1.15
KCNC1-213ENST00000640909 RRBP1Q9P2E9 1410 aaKnown RBP22.24■■□□□ 1.15
KCNC1-213ENST00000640909 WAPLQ7Z5K2 1190 aa22.24■■□□□ 1.15
KCNC1-213ENST00000640909 CABLES1Q8TDN4 633 aa22.23■■□□□ 1.15
KCNC1-213ENST00000640909 PHF8Q9UPP1 1060 aa22.23■■□□□ 1.15
KCNC1-213ENST00000640909 RREB1Q92766 1687 aa22.23■■□□□ 1.15
KCNC1-213ENST00000640909 FAM83GA6ND36 823 aa22.22■■□□□ 1.15
KCNC1-213ENST00000640909 PLEKHH1Q9ULM0 1364 aa22.22■■□□□ 1.15
KCNC1-213ENST00000640909 ITGAEP38570 1179 aa22.21■■□□□ 1.15
KCNC1-213ENST00000640909 SIRT1Q96EB6 747 aa22.19■■□□□ 1.14
KCNC1-213ENST00000640909 STK26Q9P289 416 aa22.19■■□□□ 1.14
KCNC1-213ENST00000640909 TRPM3Q9HCF6 1732 aaPredicted RBP22.18■■□□□ 1.14
KCNC1-213ENST00000640909 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
KCNC1-213ENST00000640909 ANKRD30BQ9BXX2 1392 aa22.18■■□□□ 1.14
KCNC1-213ENST00000640909 EZH2Q15910 746 aaKnown RBP22.18■■□□□ 1.14
KCNC1-213ENST00000640909 BTG4Q9NY30 223 aa22.18■■□□□ 1.14
KCNC1-213ENST00000640909 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 SPATA31A5Q5VU36 1347 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 SPATA31A7Q8IWB4 1347 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 NUP188Q5SRE5 1749 aa22.17■■□□□ 1.14
KCNC1-213ENST00000640909 NINLQ9Y2I6 1382 aa22.16■■□□□ 1.14
KCNC1-213ENST00000640909 ANKARQ7Z5J8 1434 aa22.15■■□□□ 1.14
KCNC1-213ENST00000640909 DCAF8L1A6NGE4 600 aa22.15■■□□□ 1.14
KCNC1-213ENST00000640909 CRYBG1Q9Y4K1 1723 aa22.14■■□□□ 1.14
KCNC1-213ENST00000640909 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
KCNC1-213ENST00000640909 FAM196AQ6ZSG2 479 aa22.14■■□□□ 1.13
KCNC1-213ENST00000640909 FAM182BQ5T319 152 aa22.12■■□□□ 1.13
KCNC1-213ENST00000640909 SPATA31E1Q6ZUB1 1445 aa22.11■■□□□ 1.13
KCNC1-213ENST00000640909 TMEM132EQ6IEE7 984 aa22.09■■□□□ 1.13
KCNC1-213ENST00000640909 PLEKHG5O94827 1062 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms