RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 DDX11L8A8MPP1 907 aa21.64■■□□□ 1.06
SCARB2-223ENST00000640640 DRC7Q8IY82 874 aa21.64■■□□□ 1.06
SCARB2-223ENST00000640640 ZNF692Q9BU19 519 aaPredicted RBP21.64■■□□□ 1.06
SCARB2-223ENST00000640640 ATAD2Q6PL18 1390 aa21.64■■□□□ 1.05
SCARB2-223ENST00000640640 EVA1CP58658 441 aa21.64■■□□□ 1.05
SCARB2-223ENST00000640640 WDR63Q8IWG1 891 aa21.64■■□□□ 1.05
SCARB2-223ENST00000640640 ABTB2Q8N961 1025 aa21.64■■□□□ 1.05
SCARB2-223ENST00000640640 FOXD4L5Q5VV16 416 aaPredicted RBP21.63■■□□□ 1.05
SCARB2-223ENST00000640640 FOXD4L4Q8WXT5 416 aaPredicted RBP21.63■■□□□ 1.05
SCARB2-223ENST00000640640 RAPGEF4Q8WZA2 1011 aa21.63■■□□□ 1.05
SCARB2-223ENST00000640640 DDX58O95786 925 aaKnown RBP21.63■■□□□ 1.05
SCARB2-223ENST00000640640 DIAPH3Q9NSV4 1193 aa21.62■■□□□ 1.05
SCARB2-223ENST00000640640 UGGT2Q9NYU1 1516 aa21.62■■□□□ 1.05
SCARB2-223ENST00000640640 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
SCARB2-223ENST00000640640 MAPKBP1O60336 1514 aa21.62■■□□□ 1.05
SCARB2-223ENST00000640640 TWISTNBQ3B726 338 aaPredicted RBP21.62■■□□□ 1.05
SCARB2-223ENST00000640640 THEMISQ8N1K5 641 aaPredicted RBP21.62■■□□□ 1.05
SCARB2-223ENST00000640640 SLC26A8Q96RN1 970 aa21.61■■□□□ 1.05
SCARB2-223ENST00000640640 C22orf23Q9BZE7 217 aa21.61■■□□□ 1.05
SCARB2-223ENST00000640640 NSD3Q9BZ95 1437 aa21.61■■□□□ 1.05
SCARB2-223ENST00000640640 SULT6B1Q6IMI4 303 aa21.6■■□□□ 1.05
SCARB2-223ENST00000640640 GAS2L2Q8NHY3 880 aa21.6■■□□□ 1.05
SCARB2-223ENST00000640640 ADGRF5Q8IZF2 1346 aa21.6■■□□□ 1.05
SCARB2-223ENST00000640640 GSE1Q14687 1217 aa21.59■■□□□ 1.05
SCARB2-223ENST00000640640 ATF3P18847 181 aa21.59■■□□□ 1.05
SCARB2-223ENST00000640640 CHAF1AQ13111 956 aaPredicted RBP21.59■■□□□ 1.05
SCARB2-223ENST00000640640 DDX49Q9Y6V7 483 aaKnown RBP21.59■■□□□ 1.05
SCARB2-223ENST00000640640 NLRP2Q9NX02 1062 aa21.58■■□□□ 1.05
SCARB2-223ENST00000640640 NUP153P49790 1475 aaKnown RBP21.58■■□□□ 1.05
SCARB2-223ENST00000640640 GTF2E1P29083 439 aaPredicted RBP21.58■■□□□ 1.05
SCARB2-223ENST00000640640 CSPP1Q1MSJ5 1256 aa21.58■■□□□ 1.04
SCARB2-223ENST00000640640 RUFY2Q8WXA3 655 aa21.58■■□□□ 1.04
SCARB2-223ENST00000640640 PDZRN3Q9UPQ7 1066 aa21.58■■□□□ 1.04
SCARB2-223ENST00000640640 IFIT2P09913 472 aaKnown RBP21.57■■□□□ 1.04
SCARB2-223ENST00000640640 ANO2Q9NQ90 1003 aa21.57■■□□□ 1.04
SCARB2-223ENST00000640640 ATP10BO94823 1461 aa21.57■■□□□ 1.04
SCARB2-223ENST00000640640 CHMP5Q9NZZ3 219 aa21.57■■□□□ 1.04
SCARB2-223ENST00000640640 CT47B1P0C2W7 299 aaPredicted RBP21.57■■□□□ 1.04
SCARB2-223ENST00000640640 INTS3Q68E01 1043 aaKnown RBP21.57■■□□□ 1.04
SCARB2-223ENST00000640640 WWC1Q8IX03 1113 aa21.57■■□□□ 1.04
SCARB2-223ENST00000640640 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
SCARB2-223ENST00000640640 NOB1Q9ULX3 412 aaKnown RBP21.56■■□□□ 1.04
SCARB2-223ENST00000640640 GPRASP1Q5JY77 1395 aa21.56■■□□□ 1.04
SCARB2-223ENST00000640640 ISY1Q9ULR0 285 aaKnown RBP21.56■■□□□ 1.04
SCARB2-223ENST00000640640 CCDC61Q9Y6R9 512 aa21.56■■□□□ 1.04
SCARB2-223ENST00000640640 ESCO1Q5FWF5 840 aa21.56■■□□□ 1.04
SCARB2-223ENST00000640640 KIAA2012Q0VF49 1180 aa21.55■■□□□ 1.04
SCARB2-223ENST00000640640 KIF3AQ9Y496 699 aa21.55■■□□□ 1.04
SCARB2-223ENST00000640640 RAPGEF6Q8TEU7 1601 aa21.55■■□□□ 1.04
SCARB2-223ENST00000640640 TULP1O00294 542 aaPredicted RBP21.55■■□□□ 1.04
SCARB2-223ENST00000640640 UBTFL1P0CB47 393 aaPredicted RBP21.54■■□□□ 1.04
SCARB2-223ENST00000640640 G3BP1Q13283 466 aaKnown RBP eCLIP21.54■■□□□ 1.04
SCARB2-223ENST00000640640 IDI1Q13907 227 aa21.54■■□□□ 1.04
SCARB2-223ENST00000640640 HSP90AB4PQ58FF6 505 aa21.54■■□□□ 1.04
SCARB2-223ENST00000640640 ATF7IPQ6VMQ6 1270 aa21.54■■□□□ 1.04
SCARB2-223ENST00000640640 ZKSCAN1P17029 563 aaPredicted RBP21.53■■□□□ 1.04
SCARB2-223ENST00000640640 FANCAO15360 1455 aa21.53■■□□□ 1.04
SCARB2-223ENST00000640640 FCHSD2O94868 740 aa21.52■■□□□ 1.04
SCARB2-223ENST00000640640 CCDC30Q5VVM6 783 aa21.52■■□□□ 1.04
SCARB2-223ENST00000640640 FOXD4L6Q3SYB3 417 aaPredicted RBP21.52■■□□□ 1.04
SCARB2-223ENST00000640640 FOXD4L3Q6VB84 417 aaPredicted RBP21.52■■□□□ 1.04
SCARB2-223ENST00000640640 GNAI3P08754 354 aa21.52■■□□□ 1.04
SCARB2-223ENST00000640640 TOMM22Q9NS69 142 aa21.52■■□□□ 1.04
SCARB2-223ENST00000640640 BACH2Q9BYV9 841 aa21.52■■□□□ 1.03
SCARB2-223ENST00000640640 SKOR2Q2VWA4 1001 aaPredicted RBP21.51■■□□□ 1.03
SCARB2-223ENST00000640640 RRS1Q15050 365 aaKnown RBP21.51■■□□□ 1.03
SCARB2-223ENST00000640640 NINLQ9Y2I6 1382 aa21.51■■□□□ 1.03
SCARB2-223ENST00000640640 CDC45O75419 566 aa21.51■■□□□ 1.03
SCARB2-223ENST00000640640 FRAT2O75474 233 aaPredicted RBP21.51■■□□□ 1.03
SCARB2-223ENST00000640640 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
SCARB2-223ENST00000640640 WAPLQ7Z5K2 1190 aa21.51■■□□□ 1.03
SCARB2-223ENST00000640640 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
SCARB2-223ENST00000640640 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
SCARB2-223ENST00000640640 NUDT16Q96DE0 195 aaKnown RBP21.5■■□□□ 1.03
SCARB2-223ENST00000640640 ATP6V1DQ9Y5K8 247 aa21.5■■□□□ 1.03
SCARB2-223ENST00000640640 MVPQ14764 893 aaKnown RBP21.49■■□□□ 1.03
SCARB2-223ENST00000640640 PHF14O94880 888 aa21.49■■□□□ 1.03
SCARB2-223ENST00000640640 RIC3Q7Z5B4 369 aa21.49■■□□□ 1.03
SCARB2-223ENST00000640640 PROSER2Q86WR7 435 aaPredicted RBP21.49■■□□□ 1.03
SCARB2-223ENST00000640640 DHX29Q7Z478 1369 aaKnown RBP21.49■■□□□ 1.03
SCARB2-223ENST00000640640 SLC4A2P04920 1241 aa21.48■■□□□ 1.03
SCARB2-223ENST00000640640 CTTNBP2Q8WZ74 1663 aa21.48■■□□□ 1.03
SCARB2-223ENST00000640640 SCAF11Q99590 1463 aaKnown RBP21.48■■□□□ 1.03
SCARB2-223ENST00000640640 GCC1Q96CN9 775 aa21.47■■□□□ 1.03
SCARB2-223ENST00000640640 PLEKHO1Q53GL0 409 aaPredicted RBP21.47■■□□□ 1.03
SCARB2-223ENST00000640640 FBXO31Q5XUX0 539 aaPredicted RBP21.46■■□□□ 1.03
SCARB2-223ENST00000640640 NFKBIBQ15653 356 aa21.46■■□□□ 1.03
SCARB2-223ENST00000640640 LRRFIP1Q32MZ4 808 aaKnown RBP21.46■■□□□ 1.03
SCARB2-223ENST00000640640 SYTL4Q96C24 671 aaPredicted RBP21.46■■□□□ 1.03
SCARB2-223ENST00000640640 ERC2O15083 957 aa21.46■■□□□ 1.03
SCARB2-223ENST00000640640 FAM184AQ8NB25 1140 aa21.46■■□□□ 1.03
SCARB2-223ENST00000640640 DISP3Q9P2K9 1392 aa21.45■■□□□ 1.02
SCARB2-223ENST00000640640 H3BQV1 296 aa21.45■■□□□ 1.02
SCARB2-223ENST00000640640 SURF6O75683 361 aaKnown RBP21.45■■□□□ 1.02
SCARB2-223ENST00000640640 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
SCARB2-223ENST00000640640 FAM135AQ9P2D6 1515 aa21.44■■□□□ 1.02
SCARB2-223ENST00000640640 NOS1P29475 1434 aa21.44■■□□□ 1.02
SCARB2-223ENST00000640640 SF3A1Q15459 793 aaKnown RBP21.44■■□□□ 1.02
SCARB2-223ENST00000640640 HDGFL1Q5TGJ6 251 aa21.44■■□□□ 1.02
SCARB2-223ENST00000640640 ZNF428Q96B54 188 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms