RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 PLEKHH1Q9ULM0 1364 aa23.04■■□□□ 1.28
SPIN3-240ENST00000640507 LRRC59Q96AG4 307 aaKnown RBP23.04■■□□□ 1.28
SPIN3-240ENST00000640507 RGS17Q9UGC6 210 aaPredicted RBP23.04■■□□□ 1.28
SPIN3-240ENST00000640507 DDX17Q92841 729 aaKnown RBP23.03■■□□□ 1.28
SPIN3-240ENST00000640507 LAMC1P11047 1609 aa23.02■■□□□ 1.28
SPIN3-240ENST00000640507 KNDC1Q76NI1 1749 aa23.01■■□□□ 1.27
SPIN3-240ENST00000640507 CDC42BPGQ6DT37 1551 aa23■■□□□ 1.27
SPIN3-240ENST00000640507 ESCO1Q5FWF5 840 aa22.99■■□□□ 1.27
SPIN3-240ENST00000640507 NHSL1Q5SYE7 1610 aa22.98■■□□□ 1.27
SPIN3-240ENST00000640507 PRAM1Q96QH2 718 aa22.98■■□□□ 1.27
SPIN3-240ENST00000640507 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
SPIN3-240ENST00000640507 ADGRB1O14514 1584 aa22.96■■□□□ 1.27
SPIN3-240ENST00000640507 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
SPIN3-240ENST00000640507 POGKQ9P215 609 aa22.95■■□□□ 1.26
SPIN3-240ENST00000640507 TRAK1Q9UPV9 953 aa22.95■■□□□ 1.26
SPIN3-240ENST00000640507 SHPRHQ149N8 1683 aa22.95■■□□□ 1.26
SPIN3-240ENST00000640507 DLC1Q96QB1 1528 aa22.94■■□□□ 1.26
SPIN3-240ENST00000640507 SAFB2Q14151 953 aaKnown RBP eCLIP22.93■■□□□ 1.26
SPIN3-240ENST00000640507 LRP6O75581 1613 aa22.93■■□□□ 1.26
SPIN3-240ENST00000640507 NPHP3Q7Z494 1330 aa22.93■■□□□ 1.26
SPIN3-240ENST00000640507 MEX3CQ5U5Q3 659 aaKnown RBP22.92■■□□□ 1.26
SPIN3-240ENST00000640507 POTEAQ6S8J7 498 aa22.92■■□□□ 1.26
SPIN3-240ENST00000640507 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
SPIN3-240ENST00000640507 NUTM2BA6NNL0 878 aaPredicted RBP22.91■■□□□ 1.26
SPIN3-240ENST00000640507 NUTM2EB1AL46 878 aaPredicted RBP22.91■■□□□ 1.26
SPIN3-240ENST00000640507 NUTM2AQ8IVF1 878 aaPredicted RBP22.91■■□□□ 1.26
SPIN3-240ENST00000640507 FOXO3O43524 673 aa22.91■■□□□ 1.26
SPIN3-240ENST00000640507 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
SPIN3-240ENST00000640507 SIN3AQ96ST3 1273 aa22.87■■□□□ 1.25
SPIN3-240ENST00000640507 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
SPIN3-240ENST00000640507 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
SPIN3-240ENST00000640507 L3MBTL2Q969R5 705 aa22.84■■□□□ 1.25
SPIN3-240ENST00000640507 XPCQ01831 940 aaPredicted RBP22.83■■□□□ 1.25
SPIN3-240ENST00000640507 PHF8Q9UPP1 1060 aa22.83■■□□□ 1.25
SPIN3-240ENST00000640507 HIRIP3Q9BW71 556 aaPredicted RBP22.82■■□□□ 1.24
SPIN3-240ENST00000640507 MINK1Q8N4C8 1332 aaPredicted RBP22.82■■□□□ 1.24
SPIN3-240ENST00000640507 PXDNQ92626 1479 aa22.82■■□□□ 1.24
SPIN3-240ENST00000640507 NEUROD1Q13562 356 aa22.82■■□□□ 1.24
SPIN3-240ENST00000640507 NBPF1Q3BBV0 1214 aa22.82■■□□□ 1.24
SPIN3-240ENST00000640507 WASLO00401 505 aaPredicted RBP22.81■■□□□ 1.24
SPIN3-240ENST00000640507 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
SPIN3-240ENST00000640507 KRT28Q7Z3Y7 464 aa22.8■■□□□ 1.24
SPIN3-240ENST00000640507 ADGRB2O60241 1585 aa22.79■■□□□ 1.24
SPIN3-240ENST00000640507 C8orf37Q96NL8 207 aa22.78■■□□□ 1.24
SPIN3-240ENST00000640507 KIAA1210Q9ULL0 1709 aa22.78■■□□□ 1.24
SPIN3-240ENST00000640507 EIF3AQ14152 1382 aaKnown RBP22.77■■□□□ 1.24
SPIN3-240ENST00000640507 AFF2P51816 1311 aa22.77■■□□□ 1.24
SPIN3-240ENST00000640507 ADAMTS2O95450 1211 aa22.77■■□□□ 1.24
SPIN3-240ENST00000640507 PSME1Q06323 249 aa22.77■■□□□ 1.24
SPIN3-240ENST00000640507 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
SPIN3-240ENST00000640507 KIF1AQ12756 1690 aa22.76■■□□□ 1.23
SPIN3-240ENST00000640507 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
SPIN3-240ENST00000640507 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
SPIN3-240ENST00000640507 PRR36Q9H6K5 1346 aa22.74■■□□□ 1.23
SPIN3-240ENST00000640507 COL22A1Q8NFW1 1626 aaPredicted RBP22.72■■□□□ 1.23
SPIN3-240ENST00000640507 TULP4Q9NRJ4 1543 aa22.72■■□□□ 1.23
SPIN3-240ENST00000640507 USP32Q8NFA0 1604 aa22.72■■□□□ 1.23
SPIN3-240ENST00000640507 ARHGEF28Q8N1W1 1705 aaKnown RBP22.72■■□□□ 1.23
SPIN3-240ENST00000640507 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
SPIN3-240ENST00000640507 RXRBP28702 533 aa22.71■■□□□ 1.23
SPIN3-240ENST00000640507 SBNO1A3KN83 1393 aa22.71■■□□□ 1.23
SPIN3-240ENST00000640507 CDK19Q9BWU1 502 aa22.7■■□□□ 1.22
SPIN3-240ENST00000640507 QTRT2Q9H974 415 aaKnown RBP22.7■■□□□ 1.22
SPIN3-240ENST00000640507 FNBP4Q8N3X1 1017 aaPredicted RBP22.69■■□□□ 1.22
SPIN3-240ENST00000640507 NUDT16Q96DE0 195 aaKnown RBP22.69■■□□□ 1.22
SPIN3-240ENST00000640507 TNS3Q68CZ2 1445 aa22.68■■□□□ 1.22
SPIN3-240ENST00000640507 CENPJQ9HC77 1338 aaPredicted RBP22.67■■□□□ 1.22
SPIN3-240ENST00000640507 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
SPIN3-240ENST00000640507 USP21Q9UK80 565 aa22.66■■□□□ 1.22
SPIN3-240ENST00000640507 GPRASP1Q5JY77 1395 aa22.66■■□□□ 1.22
SPIN3-240ENST00000640507 RBM6P78332 1123 aaKnown RBP22.65■■□□□ 1.22
SPIN3-240ENST00000640507 CCDC61Q9Y6R9 512 aa22.65■■□□□ 1.22
SPIN3-240ENST00000640507 ARHGEF10O15013 1369 aa22.64■■□□□ 1.22
SPIN3-240ENST00000640507 LMOD2Q6P5Q4 547 aa22.64■■□□□ 1.21
SPIN3-240ENST00000640507 ATP7BP35670 1465 aa22.63■■□□□ 1.21
SPIN3-240ENST00000640507 NBPF8Q3BBV2 869 aa22.63■■□□□ 1.21
SPIN3-240ENST00000640507 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
SPIN3-240ENST00000640507 TRPC5Q9UL62 973 aaPredicted RBP22.62■■□□□ 1.21
SPIN3-240ENST00000640507 CABLES1Q8TDN4 633 aa22.61■■□□□ 1.21
SPIN3-240ENST00000640507 TONSLQ96HA7 1378 aa22.61■■□□□ 1.21
SPIN3-240ENST00000640507 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
SPIN3-240ENST00000640507 PLEKHG3A1L390 1219 aa22.6■■□□□ 1.21
SPIN3-240ENST00000640507 HAP1P54257 671 aaPredicted RBP22.6■■□□□ 1.21
SPIN3-240ENST00000640507 SRPK2P78362 688 aaKnown RBP22.59■■□□□ 1.21
SPIN3-240ENST00000640507 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
SPIN3-240ENST00000640507 BCL9LQ86UU0 1499 aa22.58■■□□□ 1.2
SPIN3-240ENST00000640507 POLR3AO14802 1390 aaPredicted RBP22.57■■□□□ 1.2
SPIN3-240ENST00000640507 ACEP12821 1306 aa22.57■■□□□ 1.2
SPIN3-240ENST00000640507 PAK3O75914 559 aaPredicted RBP22.57■■□□□ 1.2
SPIN3-240ENST00000640507 CABP2Q9NPB3 220 aa22.57■■□□□ 1.2
SPIN3-240ENST00000640507 PLEKHG5O94827 1062 aa22.56■■□□□ 1.2
SPIN3-240ENST00000640507 ATRNO75882 1429 aa22.55■■□□□ 1.2
SPIN3-240ENST00000640507 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
SPIN3-240ENST00000640507 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
SPIN3-240ENST00000640507 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
SPIN3-240ENST00000640507 SLIT2O94813 1529 aa22.53■■□□□ 1.2
SPIN3-240ENST00000640507 ITSN1Q15811 1721 aa22.53■■□□□ 1.2
SPIN3-240ENST00000640507 MARF1Q9Y4F3 1742 aaKnown RBP22.52■■□□□ 1.2
SPIN3-240ENST00000640507 CARD11Q9BXL7 1154 aa22.52■■□□□ 1.2
SPIN3-240ENST00000640507 GJD4Q96KN9 370 aaPredicted RBP22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms