RNA–Protein interactions for RNA: ENST00000640342.1

ELP4-223, Transcript of elongator acetyltransferase complex subunit 4, human

TSL 5 BASIC

Gene ELP4, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELP4-223	ENST00000640342	NUTM2A	Q8IVF1	878 aa	Predicted RBP	18.83	■□□□□ 0.61
ELP4-223	ENST00000640342	C1orf167	Q5SNV9	1468 aa		18.83	■□□□□ 0.6
ELP4-223	ENST00000640342	ZNF772	Q68DY9	489 aa	Predicted RBP	18.82	■□□□□ 0.6
ELP4-223	ENST00000640342	NHSL1	Q5SYE7	1610 aa		18.82	■□□□□ 0.6
ELP4-223	ENST00000640342	DDX17	Q92841	729 aa	Known RBP	18.81	■□□□□ 0.6
ELP4-223	ENST00000640342	STK26	Q9P289	416 aa		18.79	■□□□□ 0.6
ELP4-223	ENST00000640342	ORAI2	Q96SN7	254 aa		18.78	■□□□□ 0.6
ELP4-223	ENST00000640342	RAB3GAP2	Q9H2M9	1393 aa		18.77	■□□□□ 0.6
ELP4-223	ENST00000640342	LRPPRC	P42704	1394 aa	Known RBP	18.76	■□□□□ 0.59
ELP4-223	ENST00000640342	PIK3C2G	O75747	1445 aa		18.76	■□□□□ 0.59
ELP4-223	ENST00000640342	TMEM132E	Q6IEE7	984 aa		18.76	■□□□□ 0.59
ELP4-223	ENST00000640342	IFT172	Q9UG01	1749 aa		18.76	■□□□□ 0.59
ELP4-223	ENST00000640342	PNPLA6	Q8IY17	1366 aa		18.75	■□□□□ 0.59
ELP4-223	ENST00000640342	ABCC11	Q96J66	1382 aa		18.74	■□□□□ 0.59
ELP4-223	ENST00000640342	TECPR2	O15040	1411 aa		18.74	■□□□□ 0.59
ELP4-223	ENST00000640342	WAPL	Q7Z5K2	1190 aa		18.74	■□□□□ 0.59
ELP4-223	ENST00000640342	SOS2	Q07890	1332 aa	Predicted RBP	18.74	■□□□□ 0.59
ELP4-223	ENST00000640342	ESCO1	Q5FWF5	840 aa		18.73	■□□□□ 0.59
ELP4-223	ENST00000640342	CDC42BPG	Q6DT37	1551 aa		18.73	■□□□□ 0.59
ELP4-223	ENST00000640342	AFF2	P51816	1311 aa		18.72	■□□□□ 0.59
ELP4-223	ENST00000640342	LAMC1	P11047	1609 aa		18.72	■□□□□ 0.59
ELP4-223	ENST00000640342	RXRB	P28702	533 aa		18.71	■□□□□ 0.59
ELP4-223	ENST00000640342	C8orf37	Q96NL8	207 aa		18.71	■□□□□ 0.59
ELP4-223	ENST00000640342	C14orf93	Q9H972	538 aa	Known RBP	18.71	■□□□□ 0.59
ELP4-223	ENST00000640342	YTHDC2	Q9H6S0	1430 aa	Known RBP	18.71	■□□□□ 0.59
ELP4-223	ENST00000640342	NPM3	O75607	178 aa	Known RBP	18.7	■□□□□ 0.58
ELP4-223	ENST00000640342	NPHP3	Q7Z494	1330 aa		18.7	■□□□□ 0.58
ELP4-223	ENST00000640342	CFAP70	Q5T0N1	1121 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	PLEKHH1	Q9ULM0	1364 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	MYOM2	P54296	1465 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	KNDC1	Q76NI1	1749 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	DHX57	Q6P158	1386 aa	Known RBP	18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	NUTM2F	A1L443	756 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	ADAMTS2	O95450	1211 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	SIRT1	Q96EB6	747 aa		18.68	■□□□□ 0.58
ELP4-223	ENST00000640342	NRXN1	Q9ULB1	1477 aa		18.67	■□□□□ 0.58
ELP4-223	ENST00000640342	NGLY1	Q96IV0	654 aa		18.67	■□□□□ 0.58
ELP4-223	ENST00000640342	FOXO3	O43524	673 aa		18.66	■□□□□ 0.58
ELP4-223	ENST00000640342	HRC	P23327	699 aa		18.65	■□□□□ 0.58
ELP4-223	ENST00000640342	QTRT2	Q9H974	415 aa	Known RBP	18.64	■□□□□ 0.57
ELP4-223	ENST00000640342	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.64	■□□□□ 0.57
ELP4-223	ENST00000640342	XPC	Q01831	940 aa	Predicted RBP	18.63	■□□□□ 0.57
ELP4-223	ENST00000640342	PXDN	Q92626	1479 aa		18.62	■□□□□ 0.57
ELP4-223	ENST00000640342	RBM6	P78332	1123 aa	Known RBP	18.62	■□□□□ 0.57
ELP4-223	ENST00000640342	PRAM1	Q96QH2	718 aa		18.61	■□□□□ 0.57
ELP4-223	ENST00000640342	FMN2	Q9NZ56	1722 aa		18.6	■□□□□ 0.57
ELP4-223	ENST00000640342	POGK	Q9P215	609 aa		18.6	■□□□□ 0.57
ELP4-223	ENST00000640342	COL22A1	Q8NFW1	1626 aa	Predicted RBP	18.6	■□□□□ 0.57
ELP4-223	ENST00000640342	SAFB2	Q14151	953 aa	Known RBP eCLIP	18.59	■□□□□ 0.57	2e-7	■■□□□ 12.7
ELP4-223	ENST00000640342	DCAF11	Q8TEB1	546 aa		18.59	■□□□□ 0.57
ELP4-223	ENST00000640342	STAC3	Q96MF2	364 aa		18.59	■□□□□ 0.57
ELP4-223	ENST00000640342	USP21	Q9UK80	565 aa		18.59	■□□□□ 0.57
ELP4-223	ENST00000640342	KDM2A	Q9Y2K7	1162 aa		18.59	■□□□□ 0.57
ELP4-223	ENST00000640342	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.58	■□□□□ 0.57
ELP4-223	ENST00000640342	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.57	■□□□□ 0.56
ELP4-223	ENST00000640342	TRPC5	Q9UL62	973 aa	Predicted RBP	18.56	■□□□□ 0.56
ELP4-223	ENST00000640342	PHF8	Q9UPP1	1060 aa		18.56	■□□□□ 0.56
ELP4-223	ENST00000640342	KIF1A	Q12756	1690 aa		18.56	■□□□□ 0.56
ELP4-223	ENST00000640342	DLC1	Q96QB1	1528 aa		18.56	■□□□□ 0.56
ELP4-223	ENST00000640342	KRT28	Q7Z3Y7	464 aa		18.55	■□□□□ 0.56
ELP4-223	ENST00000640342	TRAK1	Q9UPV9	953 aa		18.55	■□□□□ 0.56
ELP4-223	ENST00000640342	SPATA31A3	Q5VYP0	1347 aa		18.55	■□□□□ 0.56
ELP4-223	ENST00000640342	RGS12	O14924	1447 aa		18.54	■□□□□ 0.56
ELP4-223	ENST00000640342	ADGRB1	O14514	1584 aa		18.54	■□□□□ 0.56
ELP4-223	ENST00000640342	PSME1	Q06323	249 aa		18.54	■□□□□ 0.56
ELP4-223	ENST00000640342	ANKAR	Q7Z5J8	1434 aa		18.51	■□□□□ 0.55
ELP4-223	ENST00000640342	ATRN	O75882	1429 aa		18.5	■□□□□ 0.55
ELP4-223	ENST00000640342	HAP1	P54257	671 aa	Predicted RBP	18.5	■□□□□ 0.55
ELP4-223	ENST00000640342	HIRIP3	Q9BW71	556 aa	Predicted RBP	18.5	■□□□□ 0.55
ELP4-223	ENST00000640342	RGPD8	O14715	1765 aa	Predicted RBP	18.49	■□□□□ 0.55
ELP4-223	ENST00000640342	ADGRB2	O60241	1585 aa		18.49	■□□□□ 0.55
ELP4-223	ENST00000640342	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.49	■□□□□ 0.55
ELP4-223	ENST00000640342	EIF3A	Q14152	1382 aa	Known RBP	18.49	■□□□□ 0.55
ELP4-223	ENST00000640342	TNS3	Q68CZ2	1445 aa		18.48	■□□□□ 0.55
ELP4-223	ENST00000640342	BCL9L	Q86UU0	1499 aa		18.48	■□□□□ 0.55
ELP4-223	ENST00000640342	LMOD2	Q6P5Q4	547 aa		18.48	■□□□□ 0.55
ELP4-223	ENST00000640342	PMFBP1	Q8TBY8	1022 aa		18.48	■□□□□ 0.55
ELP4-223	ENST00000640342	SBNO1	A3KN83	1393 aa		18.48	■□□□□ 0.55
ELP4-223	ENST00000640342	MARF1	Q9Y4F3	1742 aa	Known RBP	18.47	■□□□□ 0.55
ELP4-223	ENST00000640342	ARHGEF10	O15013	1369 aa		18.46	■□□□□ 0.55
ELP4-223	ENST00000640342	WASL	O00401	505 aa	Predicted RBP	18.45	■□□□□ 0.54
ELP4-223	ENST00000640342	PLEKHG5	O94827	1062 aa		18.44	■□□□□ 0.54
ELP4-223	ENST00000640342	ATAD2	Q6PL18	1390 aa		18.44	■□□□□ 0.54
ELP4-223	ENST00000640342	UNC5CL	Q8IV45	518 aa		18.44	■□□□□ 0.54
ELP4-223	ENST00000640342	GJD4	Q96KN9	370 aa	Predicted RBP	18.44	■□□□□ 0.54
ELP4-223	ENST00000640342	USP32	Q8NFA0	1604 aa		18.44	■□□□□ 0.54
ELP4-223	ENST00000640342	GPRASP1	Q5JY77	1395 aa		18.43	■□□□□ 0.54
ELP4-223	ENST00000640342	CABLES1	Q8TDN4	633 aa		18.43	■□□□□ 0.54
ELP4-223	ENST00000640342	SLIT2	O94813	1529 aa		18.43	■□□□□ 0.54
ELP4-223	ENST00000640342	TULP4	Q9NRJ4	1543 aa		18.43	■□□□□ 0.54
ELP4-223	ENST00000640342	PRR36	Q9H6K5	1346 aa		18.43	■□□□□ 0.54
ELP4-223	ENST00000640342	NGDN	Q8NEJ9	315 aa	Known RBP	18.41	■□□□□ 0.54
ELP4-223	ENST00000640342	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	18.4	■□□□□ 0.54
ELP4-223	ENST00000640342	ARHGEF28	Q8N1W1	1705 aa	Known RBP	18.38	■□□□□ 0.53
ELP4-223	ENST00000640342	RALGAPB	Q86X10	1494 aa		18.37	■□□□□ 0.53
ELP4-223	ENST00000640342	NUDT16	Q96DE0	195 aa	Known RBP	18.37	■□□□□ 0.53
ELP4-223	ENST00000640342	PAK3	O75914	559 aa	Predicted RBP	18.36	■□□□□ 0.53
ELP4-223	ENST00000640342	KIAA1210	Q9ULL0	1709 aa		18.35	■□□□□ 0.53
ELP4-223	ENST00000640342	VPS72	Q15906	364 aa		18.35	■□□□□ 0.53
ELP4-223	ENST00000640342	CDK19	Q9BWU1	502 aa		18.35	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms